RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CCSER2Q9H7U1 834 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 AGPAT3Q9NRZ7 376 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 KBTBD4Q9NVX7 518 aa18.39■□□□□ 0.53
PKP3-208ENST00000531857 NXF1Q9UBU9 619 aaKnown RBP18.39■□□□□ 0.53
PKP3-208ENST00000531857 PKD1L2Q7Z442 2459 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 TBC1D3BA6NDS4 549 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 SRRM3A6NNA2 597 aaPredicted RBP18.38■□□□□ 0.53
PKP3-208ENST00000531857 EIF3DO15371 548 aaKnown RBP eCLIP18.38■□□□□ 0.53
PKP3-208ENST00000531857 CFIP05156 583 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 GABRG2P18507 467 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 CYP2J2P51589 502 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 E2F4Q16254 413 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 SPDYCQ5MJ68 293 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 PAQR9Q6ZVX9 377 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 PIP4P1Q86T03 277 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 TMEM25Q86YD3 366 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 ZNF513Q8N8E2 541 aaPredicted RBP18.38■□□□□ 0.53
PKP3-208ENST00000531857 TRIM9Q9C026 710 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 XYLT2Q9H1B5 865 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 TNMDQ9H2S6 317 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 MORC2Q9Y6X9 1032 aaPredicted RBP18.38■□□□□ 0.53
PKP3-208ENST00000531857 DMXL2Q8TDJ6 3036 aa18.38■□□□□ 0.53
PKP3-208ENST00000531857 TMEM8BA6NDV4 472 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 HOXC11O43248 304 aaPredicted RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 WASP42768 502 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 PGFP49763 221 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 CDH8P55286 799 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 RPL6Q02878 288 aaKnown RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 BYSLQ13895 437 aaKnown RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 C10orf76Q5T2E6 689 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 NELFCDQ8IXH7 590 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 PDZD8Q8NEN9 1154 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 OVCA2Q8WZ82 227 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 ELMO3Q96BJ8 720 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 OTUB2Q96DC9 234 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 ERLEC1Q96DZ1 483 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 GTPBP2Q9BX10 602 aaKnown RBP18.37■□□□□ 0.53
PKP3-208ENST00000531857 SLC32A1Q9H598 525 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 SMYD3Q9H7B4 428 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 DEC1Q9P2X7 70 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 KLK13Q9UKR3 277 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 SH3BP1Q9Y3L3 701 aa18.37■□□□□ 0.53
PKP3-208ENST00000531857 AP5Z1O43299 807 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 STAU1O95793 577 aaKnown RBP18.36■□□□□ 0.53
PKP3-208ENST00000531857 ATRXP46100 2492 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 FAM193AP78312 1265 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 ASIC1P78348 528 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 SIM1P81133 766 aaPredicted RBP18.36■□□□□ 0.53
PKP3-208ENST00000531857 TRPC3Q13507 836 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 ANO4Q32M45 955 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 SNX30Q5VWJ9 437 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 BTBD8Q5XKL5 378 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 FAM35AQ86V20 835 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 XXYLT1Q8NBI6 393 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 OR2I1PQ8NGU4 316 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 SCFD1Q8WVM8 642 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 ZCCHC14Q8WYQ9 949 aaKnown RBP18.36■□□□□ 0.53
PKP3-208ENST00000531857 ACOX2Q99424 681 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 SPHK2Q9NRA0 654 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 IL37Q9NZH6 218 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 GMIPQ9P107 970 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 SLC6A14Q9UN76 642 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 NEUROG3Q9Y4Z2 214 aa18.36■□□□□ 0.53
PKP3-208ENST00000531857 DSPP15924 2871 aaKnown RBP18.36■□□□□ 0.53
PKP3-208ENST00000531857 A0A1W2PQF6 199 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 ZDHHC11BP0C7U3 371 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 IRF1P10914 325 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 HOXB2P14652 356 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 DPP6P42658 865 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 CASP4P49662 377 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 SLC5A3P53794 718 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 COL9A2Q14055 689 aaPredicted RBP18.35■□□□□ 0.53
PKP3-208ENST00000531857 DUOXA1Q1HG43 343 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 PLEKHO2Q8TD55 490 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 KCNV2Q8TDN2 545 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 DHX58Q96C10 678 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 MED10Q9BTT4 135 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
PKP3-208ENST00000531857 IGHV1OR15-9A0A0B4J2B8 117 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 UPK3BL1B0FP48 263 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 UPK3BL2E5RIL1 263 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 SERPINF2P08697 491 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 NTSR1P30989 418 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 ATICP31939 592 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 HOXD12P35452 270 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 TUBP50607 506 aa18.34■□□□□ 0.53
PKP3-208ENST00000531857 ATXN3P54252 364 aaPredicted RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
PKP3-208ENST00000531857 ZNF33AQ06730 810 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms