RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 EMC10Q5UCC4 262 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 PEAR1Q5VY43 1037 aaPredicted RBP20.24■□□□□ 0.83
UBXN1-212ENST00000531625 SLC23A3Q6PIS1 610 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 KRBA2Q6ZNG9 492 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 HS2ST1Q7LGA3 356 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 TMEFF1Q8IYR6 380 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 PHTF2Q8N3S3 785 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 DEFB124Q8NES8 71 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 ENGASEQ8NFI3 743 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 KCNV2Q8TDN2 545 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 OVCA2Q8WZ82 227 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 DUSP9Q99956 384 aaKnown RBP20.24■□□□□ 0.83
UBXN1-212ENST00000531625 SLC32A1Q9H598 525 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 LMBRD1Q9NUN5 540 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 TMEM74BQ9NUR3 256 aa20.24■□□□□ 0.83
UBXN1-212ENST00000531625 TNRC6BQ9UPQ9 1833 aaKnown RBP20.24■□□□□ 0.83
UBXN1-212ENST00000531625 UPK3BL1B0FP48 263 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 UPK3BL2E5RIL1 263 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 SCAMP3O14828 347 aaKnown RBP20.23■□□□□ 0.83
UBXN1-212ENST00000531625 CST3P01034 146 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-212ENST00000531625 MBL2P11226 248 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-212ENST00000531625 CASP1P29466 404 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 HOXD13P35453 343 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 CACNA2D1P54289 1103 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 LY6G5CQ5SRR4 150 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 NUP93Q8N1F7 819 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 FRMD1Q8N878 549 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 GLIS3Q8NEA6 775 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 PDZD8Q8NEN9 1154 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 OR6B3Q8NGW1 331 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 HMGB4Q8WW32 186 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 CCDC34Q96HJ3 373 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 C7orf25Q9BPX7 421 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 TRIM9Q9C026 710 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 ZNF518BQ9C0D4 1074 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 BLZF1Q9H2G9 400 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 BCCIPQ9P287 314 aaKnown RBP eCLIP20.23■□□□□ 0.83
UBXN1-212ENST00000531625 PILRBQ9UKJ0 227 aa20.23■□□□□ 0.83
UBXN1-212ENST00000531625 EIF3DO15371 548 aaKnown RBP eCLIP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 RTN3O95197 1032 aaPredicted RBP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 ENGP17813 658 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 YWHAQP27348 245 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 GAD2Q05329 585 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 PREPLQ4J6C6 727 aaPredicted RBP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 LYSMD4Q5XG99 296 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 PIP4P1Q86T03 277 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 ETFBKMTQ8IXQ9 262 aa20.22■□□□□ 0.83
UBXN1-212ENST00000531625 ZFRQ96KR1 1074 aaKnown RBP20.22■□□□□ 0.83
UBXN1-212ENST00000531625 TCRBV21S2A2A0A5A6 115 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 HOXC11O43248 304 aaPredicted RBP20.21■□□□□ 0.83
UBXN1-212ENST00000531625 DLATP10515 647 aaKnown RBP20.21■□□□□ 0.83
UBXN1-212ENST00000531625 TNNI1P19237 187 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 MAPK8P45983 427 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 TNNC1P63316 161 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 KDSRQ06136 332 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 SEMA3BQ13214 749 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 CUL4BQ13620 913 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 PSMD6Q15008 389 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 WDR72Q3MJ13 1102 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 SNX30Q5VWJ9 437 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 ARMCX6Q7L4S7 300 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 TRMT11Q7Z4G4 463 aaKnown RBP20.21■□□□□ 0.83
UBXN1-212ENST00000531625 B3GALNT2Q8NCR0 500 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 CEP76Q8TAP6 659 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 CGRRF1Q99675 332 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 B3GNT5Q9BYG0 378 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 DPEP3Q9H4B8 488 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 NEUROG3Q9Y4Z2 214 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 FREM2Q5SZK8 3169 aa20.21■□□□□ 0.83
UBXN1-212ENST00000531625 TBC1D3BA6NDS4 549 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 COCHO43405 550 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 ITPKAP23677 461 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 TUBP50607 506 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 HECTD3Q5T447 861 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 EPM2AIP1Q7L775 607 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-212ENST00000531625 PGBD3Q8N328 593 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 ZNF507Q8TCN5 953 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 HPS3Q969F9 1004 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 FBXO32Q969P5 355 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 TIGD1Q96MW7 591 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 ZDHHC4Q9NPG8 344 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 AGPAT3Q9NRZ7 376 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 IL37Q9NZH6 218 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 DEC1Q9P2X7 70 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 SLC6A14Q9UN76 642 aa20.2■□□□□ 0.82
UBXN1-212ENST00000531625 A8MXQ7 604 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 CLDN5O00501 218 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 TGFB1I1O43294 461 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 AP5Z1O43299 807 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 ATICP31939 592 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 SNRPFP62306 86 aaKnown RBP20.19■□□□□ 0.82
UBXN1-212ENST00000531625 CYP24A1Q07973 514 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 IFRD2Q12894 506 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-212ENST00000531625 DUOXA1Q1HG43 343 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 BTBD8Q5XKL5 378 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
UBXN1-212ENST00000531625 SLC36A4Q6YBV0 504 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms