RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SDC4P31431 198 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 RFC1P35251 1148 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-228ENST00000531007 PTPN9P43378 593 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 RWDD2BP57060 319 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 MAP3K7CLP57077 242 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 MRPS5P82675 430 aaKnown RBP10.34□□□□□ -0.75
CTNND1-228ENST00000531007 DSG1Q02413 1049 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 CYP4A22Q5TCH4 519 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 KIAA1841Q6NSI8 718 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 FAM183BPQ6ZVS7 135 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 C16orf59Q7L2K0 433 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 CTAGE6Q86UF2 777 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 CTAGE4Q8IX94 777 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 ARHGAP18Q8N392 663 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 FIBCD1Q8N539 461 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 COLGALT1Q8NBJ5 622 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 DPF3Q92784 378 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 GOLGA1Q92805 767 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 GPR62Q9BZJ7 368 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 FBXO44Q9H4M3 255 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 METTL5Q9NRN9 209 aaKnown RBP10.34□□□□□ -0.75
CTNND1-228ENST00000531007 EVA1BQ9NVM1 165 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 TMEM59LQ9UK28 342 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 LZTS1Q9Y250 596 aa10.34□□□□□ -0.75
CTNND1-228ENST00000531007 CFAP99D6REC4 459 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 GOLGA8SH3BPF8 625 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 CCDC188H7C350 402 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PGRMC1O00264 195 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 CLDN5O00501 218 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 DDX3YO15523 660 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PAPSS1O43252 624 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 URODP06132 367 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PDGFRAP16234 1089 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PSMA2P25787 234 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 MATKP42679 507 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 TUFMP49411 452 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 GLUD2P49448 558 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 RGS7P49802 495 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PEX5P50542 639 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 TKTL1P51854 596 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 RPL7AP62424 266 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 RPL10AP62906 217 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 YWHAZP63104 245 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 SLC39A12Q504Y0 691 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 BOLA3Q53S33 107 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 ODF2Q5BJF6 829 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 TPGS2Q68CL5 300 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 CCDC70Q6NSX1 233 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 STRADAQ7RTN6 431 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 VSIG1Q86XK7 387 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 CEP57Q86XR8 500 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 CREG2Q8IUH2 290 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 HERC6Q8IVU3 1022 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 KATNAL2Q8IYT4 538 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 EXD1Q8NHP7 514 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 RBM41Q96IZ5 413 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 SPATA17Q96L03 361 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 SAMD11Q96NU1 681 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 TBCBQ99426 244 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 SMOQ99835 787 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.33□□□□□ -0.765e-8■□□□□ 8.9
CTNND1-228ENST00000531007 HOMER3Q9NSC5 361 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 FNIP2Q9P278 1114 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 STAP1Q9ULZ2 295 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
CTNND1-228ENST00000531007 USP3Q9Y6I4 520 aa10.33□□□□□ -0.76
CTNND1-228ENST00000531007 GOLGA6L10A0A0M3HER8 536 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 TTC24A2A3L6 582 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 TMEM110-MUSTN1A8MSY1 372 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 HHLA1C9JL84 531 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 F8W810 466 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 HCRTO43612 131 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 NCK2O43639 380 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 DAB1O75553 588 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ZRANB2O95218 330 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ZBED1O96006 694 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RB1P06400 928 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 CPB1P15086 417 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ATP2A2P16615 1042 aaKnown RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 BDNFP23560 247 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 NOS2P35228 1153 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 PTPN7P35236 360 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 GRIK1P39086 918 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 AIF1P55008 147 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 UBE3AQ05086 875 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 ADIGQ0VDE8 80 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 PSMD5Q16401 504 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 SLC25A52Q3SY17 297 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 C2CD6Q53TS8 623 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RTP2Q5QGT7 225 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RASIP1Q5U651 963 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 CC2D1AQ6P1N0 951 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-228ENST00000531007 LYPD8Q6UX82 237 aa10.32□□□□□ -0.76
CTNND1-228ENST00000531007 RTL10Q7L3V2 364 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms