RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ENGP17813 658 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 SPINK2P20155 84 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 HOXD12P35452 270 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 CDH8P55286 799 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 NUDT18Q6ZVK8 323 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 ARMCX6Q7L4S7 300 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 TRMT11Q7Z4G4 463 aaKnown RBP15.83■□□□□ 0.12
CAPN1-219ENST00000530495 TMEM25Q86YD3 366 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 BBS7Q8IWZ6 715 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 NELFCDQ8IXH7 590 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 PGBD3Q8N328 593 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 NAT16Q8N8M0 369 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 DEFB124Q8NES8 71 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 SCNM1Q9BWG6 230 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 ADAM33Q9BZ11 813 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 CCSER2Q9H7U1 834 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 SPHK2Q9NRA0 654 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 DEC1Q9P2X7 70 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 SH3BP1Q9Y3L3 701 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 STARD13Q9Y3M8 1113 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 ATP8B3O60423 1300 aa15.83■□□□□ 0.12
CAPN1-219ENST00000530495 TMEM8BA6NDV4 472 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 UPK3BL1B0FP48 263 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 UPK3BL2E5RIL1 263 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 AP5Z1O43299 807 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 STX6O43752 255 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 PHACTR2O75167 634 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 ITPKAP23677 461 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 AP3M2P53677 418 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 SLC5A3P53794 718 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 CLDN10P78369 228 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 BMT2Q1RMZ1 405 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 LYSMD4Q5XG99 296 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 SHC4Q6S5L8 630 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 UNC13DQ70J99 1090 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 FAM35AQ86V20 835 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF513Q8N8E2 541 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-219ENST00000530495 GATA6Q92908 595 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 SMARCD1Q96GM5 515 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 TNIP3Q96KP6 325 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 MED10Q9BTT4 135 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 SLC32A1Q9H598 525 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 SMYD3Q9H7B4 428 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 DMAP1Q9NPF5 467 aaPredicted RBP15.82■□□□□ 0.12
CAPN1-219ENST00000530495 TFIP11Q9UBB9 837 aaKnown RBP15.82■□□□□ 0.12
CAPN1-219ENST00000530495 RALYQ9UKM9 306 aaKnown RBP15.82■□□□□ 0.12
CAPN1-219ENST00000530495 HCN2Q9UL51 889 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 ADAMTS9Q9P2N4 1935 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 PCNX2A6NKB5 2137 aa15.82■□□□□ 0.12
CAPN1-219ENST00000530495 CUTAO60888 179 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 GABRG2P18507 467 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 NTSR1P30989 418 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 MAPK8P45983 427 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 CASP4P49662 377 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 SEMA3BQ13214 749 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 KNOP1Q1ED39 458 aaKnown RBP15.81■□□□□ 0.12
CAPN1-219ENST00000530495 DUOXA1Q1HG43 343 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 ANO4Q32M45 955 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF667Q5HYK9 610 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 C10orf76Q5T2E6 689 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 SLC36A4Q6YBV0 504 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 HTR3DQ70Z44 454 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 PIP4P1Q86T03 277 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 FUKQ8N0W3 1084 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 TERB1Q8NA31 727 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 CEP76Q8TAP6 659 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 PLEKHO2Q8TD55 490 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 PARD3BQ8TEW8 1205 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 WBP2Q969T9 261 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 CSNK1G1Q9HCP0 422 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 GMIPQ9P107 970 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 SLC6A14Q9UN76 642 aa15.81■□□□□ 0.12
CAPN1-219ENST00000530495 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 A0A1W2PQF6 199 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 GREM1O60565 184 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 EXOC3O60645 756 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 C4BPAP04003 597 aaKnown RBP15.8■□□□□ 0.12
CAPN1-219ENST00000530495 SERPINF2P08697 491 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 RPL6Q02878 288 aaKnown RBP15.8■□□□□ 0.12
CAPN1-219ENST00000530495 ACOT1Q86TX2 421 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 CRYBG2Q8N1P7 616 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 ZMIZ2Q8NF64 920 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 ZNF396Q96N95 335 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-219ENST00000530495 SDCBP2Q9H190 292 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 FBXO44Q9H4M3 255 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 SLC39A2Q9NP94 309 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 NEUROG3Q9Y4Z2 214 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 MYH10P35580 1976 aa15.8■□□□□ 0.12
CAPN1-219ENST00000530495 GON4LQ3T8J9 2241 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 ATXN2Q99700 1313 aaKnown RBP15.79■□□□□ 0.12
CAPN1-219ENST00000530495 TRIM24O15164 1050 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 POLR2DO15514 142 aaKnown RBP15.79■□□□□ 0.12
CAPN1-219ENST00000530495 AP1G2O75843 785 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 BEST1O76090 585 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 VNN1O95497 513 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 YEATS4O95619 227 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 CFIP05156 583 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 HOXB2P14652 356 aa15.79■□□□□ 0.12
CAPN1-219ENST00000530495 CASP1P29466 404 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms