RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 NAA15Q9BXJ9 866 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 NMUR1Q9HB89 426 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 ACP6Q9NPH0 428 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 PLCB1Q9NQ66 1216 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 CPQQ9Y646 472 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 HELZP42694 1942 aaKnown RBP13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 TICRRQ7Z2Z1 1910 aa13.34□□□□□ -0.27
CCDC90B-216ENST00000529856 MYO16Q9Y6X6 1858 aa13.33□□□□□ -0.27
CCDC90B-216ENST00000529856 COL4A2P08572 1712 aa13.33□□□□□ -0.27
CCDC90B-216ENST00000529856 KANSL1LA0AUZ9 987 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 SHISA7A6NL88 538 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 LGALS16A8MUM7 142 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 MAN2B1O00754 1011 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 PI15O43692 258 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 GABBR2O75899 941 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ZBED1O96006 694 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 UCHL3P15374 230 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 RFX1P22670 979 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 GNA15P30679 374 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 CLCN1P35523 988 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ATP5C1P36542 298 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 GPD2P43304 727 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 TNK2Q07912 1038 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 MEA1Q16626 185 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ZSCAN23Q3MJ62 389 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 PMF1Q6P1K2 205 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 KLHDC10Q6PID8 442 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ZNF852Q6ZMS4 543 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 SCML4Q8N228 414 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 TMEM105Q8N8V8 129 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 OSCP1Q8WVF1 389 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ZFRQ96KR1 1074 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 HSFY1Q96LI6 401 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 ULBP1Q9BZM6 244 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 C8orf33Q9H7E9 229 aaPredicted RBP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 HPS4Q9NQG7 708 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 SMPD4Q9NXE4 827 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 GTSE1Q9NYZ3 720 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 CLIC5Q9NZA1 410 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 NAGPAQ9UK23 515 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 SIK3Q9Y2K2 1263 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 PIAS3Q9Y6X2 628 aa13.33□□□□□ -0.28
CCDC90B-216ENST00000529856 COL4A3Q01955 1670 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 THAP12O43422 761 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 TBX18O95935 607 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RALAP11233 206 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RARGP13631 454 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 CD72P21854 359 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RPL34P49207 117 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RGS7P49802 495 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 KLK7P49862 253 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 KPNA1P52294 538 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 UBXN1Q04323 297 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 PTK2Q05397 1052 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 ADIGQ0VDE8 80 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RUNX3Q13761 415 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 RAPGEF1Q13905 1077 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 ITPRIPL2Q3MIP1 535 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 DENND1BQ6P3S1 775 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 DDX42Q86XP3 938 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 ARHGAP18Q8N392 663 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 TTC16Q8NEE8 873 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 TTC8Q8TAM2 541 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 STK32AQ8WU08 396 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 NDRG1Q92597 394 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 NELL2Q99435 816 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 KLF16Q9BXK1 252 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 STK33Q9BYT3 514 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 OSBPL6Q9BZF3 934 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 FOXQ1Q9C009 403 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 NACA2Q9H009 215 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 GANQ9H2C0 597 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 LINC00597Q9H2U6 94 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 CFAP97Q9P2B7 532 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 MRPS17Q9Y2R5 130 aaKnown RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 SIT1Q9Y3P8 196 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 MTF2Q9Y483 593 aaPredicted RBP13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 ZDBF2Q9HCK1 2354 aa13.32□□□□□ -0.28
CCDC90B-216ENST00000529856 KMT2EQ8IZD2 1858 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 ZNF318Q5VUA4 2279 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 E2F8A0AVK6 867 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 OTOL1A6NHN0 477 aaPredicted RBP13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 FAM170BA6NMN3 283 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 CAVIN2O95810 425 aa13.31□□□□□ -0.28
CCDC90B-216ENST00000529856 PNMA6AP0CW24 399 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms