RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 RNF40O75150 1001 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 POU2F2P09086 479 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PTPN1P18031 435 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 MTHFRP42898 656 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 ASPAP45381 313 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 MTIF2P46199 727 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 TUFMP49411 452 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 NOP14P78316 857 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 CETN1Q12798 172 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SQSTM1Q13501 440 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 CBX2Q14781 532 aaPredicted RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 MAPRE1Q15691 268 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SYCP2LQ5T4T6 812 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PPP4R4Q6NUP7 873 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 UNC93AQ86WB7 457 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 JAMLQ86YT9 394 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM114A1Q8IWE2 563 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 CRYBG2Q8N1P7 616 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 MYCBPAPQ8TBZ2 947 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SPPL2BQ8TCT7 592 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SMG7Q92540 1137 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 EDEM1Q92611 657 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SLC39A13Q96H72 371 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 RIPOR3Q96MK2 946 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 NECTIN4Q96NY8 510 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PGLYRP2Q96PD5 576 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SYT15Q9BQS2 421 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 TUBGCP2Q9BSJ2 902 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PHF7Q9BWX1 381 aaPredicted RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM124BQ9H5Z6 455 aaPredicted RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SMYD3Q9H7B4 428 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PIDD1Q9HB75 910 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 ARNT2Q9HBZ2 717 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 WDR6Q9NNW5 1121 aaKnown RBP6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 CRTAC1Q9NQ79 661 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 EVA1BQ9NVM1 165 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 FAM8A1Q9UBU6 413 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 CDH22Q9UJ99 828 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 PCDHB5Q9Y5E4 795 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 INSL5Q9Y5Q6 135 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 IKBKGQ9Y6K9 419 aa6.65□□□□□ -1.35
ATPAF1-209ENST00000529214 SYCE3A1L190 88 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 LRRC10BA6NIK2 292 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TMEM229AB2RXF0 380 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 KCNJ18B7U540 433 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CCL16O15467 120 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 XYLBO75191 536 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 LRG1P02750 347 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 PDGFAP04085 211 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CCDC159P0C7I6 412 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 HAPLN1P10915 354 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 PTPN2P17706 415 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 EEF1GP26641 437 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 RAP1GAPP47736 663 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ALDH1A3P47895 512 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 SOX9P48436 509 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CDR1P51861 262 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 NDST1P52848 882 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 SESN3P58005 492 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 IRX1P78414 480 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 MYL5Q02045 173 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 INCA1Q0VD86 236 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TWF1Q12792 350 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 KCNJ12Q14500 433 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 NCAPHQ15003 741 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 FXNQ16595 210 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 MAN2A1Q16706 1144 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 MGAT5BQ3V5L5 792 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CFAP221Q4G0U5 840 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ANO6Q4KMQ2 910 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 VWA3BQ502W6 1294 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 HSP90AA4PQ58FG1 418 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TCP11X2Q5H9J9 407 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 GRASPQ7Z6J2 395 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 KRT77Q7Z794 578 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 NDUFAF2Q8N183 169 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TTC39CQ8N584 583 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TTC9BQ8N6N2 239 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 WHAMMQ8TF30 809 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CPLX3Q8WVH0 158 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 GOLGA1Q92805 767 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 VMP1Q96GC9 406 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 PCED1BQ96HM7 432 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 FUBP3Q96I24 572 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 TNIP3Q96KP6 325 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ZNF512Q96ME7 567 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 BPIFA3Q9BQP9 254 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 NAT10Q9H0A0 1025 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 NDST4Q9H3R1 872 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 DPEP3Q9H4B8 488 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 POMKQ9H5K3 350 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 CEP72Q9P209 647 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 DNMT3BQ9UBC3 853 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 ACAD8Q9UKU7 415 aa6.64□□□□□ -1.35
ATPAF1-209ENST00000529214 C5orf42Q9H799 3197 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms