RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 HNRNPDQ14103 355 aaKnown RBP16.69■□□□□ 0.26
CTTN-212ENST00000527962 E2F4Q16254 413 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 ZNF699Q32M78 642 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 C10orf76Q5T2E6 689 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 UNC13DQ70J99 1090 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 C12orf40Q86WS4 652 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 NELFCDQ8IXH7 590 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 C12orf56Q8IXR9 622 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 NAT16Q8N8M0 369 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 C7orf25Q9BPX7 421 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 SCNM1Q9BWG6 230 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 VRTNQ9H8Y1 702 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 TLR8Q9NR97 1041 aaKnown RBP16.69■□□□□ 0.26
CTTN-212ENST00000527962 TFIP11Q9UBB9 837 aaKnown RBP16.69■□□□□ 0.26
CTTN-212ENST00000527962 LSM7Q9UK45 103 aaKnown RBP16.69■□□□□ 0.26
CTTN-212ENST00000527962 PILRBQ9UKJ0 227 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 FAM208BQ5VWN6 2430 aa16.69■□□□□ 0.26
CTTN-212ENST00000527962 UPK3BL1B0FP48 263 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 UPK3BL2E5RIL1 263 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 H0Y626 953 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 STX6O43752 255 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 ADAM23O75077 832 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 TRIM16O95361 564 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 HOXB2P14652 356 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 NTSR1P30989 418 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 GRAMD4Q6IC98 578 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 FAM35AQ86V20 835 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 SFTPA1Q8IWL2 248 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 ETFBKMTQ8IXQ9 262 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 TERB1Q8NA31 727 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 SCAMP5Q8TAC9 235 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 SCFD1Q8WVM8 642 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 GTPBP2Q9BX10 602 aaKnown RBP16.68■□□□□ 0.26
CTTN-212ENST00000527962 DNAI2Q9GZS0 605 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 XYLT2Q9H1B5 865 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.68■□□□□ 0.262e-6■■■■■ 40.7
CTTN-212ENST00000527962 TMEM74BQ9NUR3 256 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 IL37Q9NZH6 218 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 WDR35Q9P2L0 1181 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 MBD1Q9UIS9 605 aaPredicted RBP16.68■□□□□ 0.26
CTTN-212ENST00000527962 MTMR6Q9Y217 621 aa16.68■□□□□ 0.26
CTTN-212ENST00000527962 PVALEFA0A1B0GWK0 134 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 ANTXRLA6NF34 631 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 CUTAO60888 179 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 OPHN1O60890 802 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 AP1G2O75843 785 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
CTTN-212ENST00000527962 SYPP08247 313 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 SERPINF2P08697 491 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 ITPKAP23677 461 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 SIM1P81133 766 aaPredicted RBP16.67■□□□□ 0.26
CTTN-212ENST00000527962 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 NCOA4Q13772 614 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 KNOP1Q1ED39 458 aaKnown RBP16.67■□□□□ 0.26
CTTN-212ENST00000527962 SGSM1Q2NKQ1 1148 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 BBS7Q8IWZ6 715 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 CHPFQ8IZ52 775 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 ZNF516Q92618 1163 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 ZFRQ96KR1 1074 aaKnown RBP16.67■□□□□ 0.26
CTTN-212ENST00000527962 CCSER2Q9H7U1 834 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 KRT82Q9NSB4 513 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 TMEM30AQ9NV96 361 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 WASF3Q9UPY6 502 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 STARD13Q9Y3M8 1113 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 NME7Q9Y5B8 376 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 EML5Q05BV3 1969 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 ABCA7Q8IZY2 2146 aa16.67■□□□□ 0.26
CTTN-212ENST00000527962 FAM92AA1XBS5 289 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 TLR5O60602 858 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 YEATS4O95619 227 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 RPN1P04843 607 aaKnown RBP16.66■□□□□ 0.26
CTTN-212ENST00000527962 ZDHHC11BP0C7U3 371 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 IRF1P10914 325 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
CTTN-212ENST00000527962 SPINK2P20155 84 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 ZNF33AQ06730 810 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 BMT2Q1RMZ1 405 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 SYCP2LQ5T4T6 812 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 PEAR1Q5VY43 1037 aaPredicted RBP16.66■□□□□ 0.26
CTTN-212ENST00000527962 HTR3DQ70Z44 454 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 TADA2BQ86TJ2 420 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 TMEM25Q86YD3 366 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 PHTF2Q8N3S3 785 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 FRMD1Q8N878 549 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 TAF4BQ92750 862 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 FAM124BQ9H5Z6 455 aaPredicted RBP16.66■□□□□ 0.26
CTTN-212ENST00000527962 SMYD3Q9H7B4 428 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 ZDHHC4Q9NPG8 344 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 DNAJC17Q9NVM6 304 aaKnown RBP16.66■□□□□ 0.26
CTTN-212ENST00000527962 GMIPQ9P107 970 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 CALCOCO1Q9P1Z2 691 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 SUSD2Q9UGT4 822 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 FRYQ5TBA9 3013 aa16.66■□□□□ 0.26
CTTN-212ENST00000527962 NDUFS2O75306 463 aa16.65■□□□□ 0.26
CTTN-212ENST00000527962 GNSP15586 552 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms