RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PKN3Q6P5Z2 889 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 NMUR1Q9HB89 426 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 NAGPAQ9UK23 515 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 PCDHB4Q9Y5E5 795 aa16.38■□□□□ 0.21
CAPN1-213ENST00000527897 RIF1Q5UIP0 2472 aaKnown RBP16.37■□□□□ 0.21
CAPN1-213ENST00000527897 MDM4O15151 490 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 AFPP02771 609 aaKnown RBP16.37■□□□□ 0.21
CAPN1-213ENST00000527897 CYP17A1P05093 508 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 RARGP13631 454 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 DRD1P21728 446 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 KIF11P52732 1056 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 SGO2Q562F6 1265 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 TMEM270Q6UE05 265 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 SYNPOQ8N3V7 929 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
CAPN1-213ENST00000527897 PNPLA8Q9NP80 782 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 OSER1Q9NX31 292 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 TBC1D14Q9P2M4 693 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 HESX1Q9UBX0 185 aa16.37■□□□□ 0.21
CAPN1-213ENST00000527897 PTPRZ1P23471 2315 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-213ENST00000527897 E2F8A0AVK6 867 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 CHURC1-FNTBB4DL54 471 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 HOXC13P31276 330 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
CAPN1-213ENST00000527897 FNTBP49356 437 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 SEC13P55735 322 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 DMWDQ09019 674 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 DHCR24Q15392 516 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-213ENST00000527897 C10orf120Q5SQS8 335 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ARHGAP17Q68EM7 881 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 FOXR2Q6PJQ5 311 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 RRAGAQ7L523 313 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 PIGZQ86VD9 579 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 TTC30AQ86WT1 665 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 TRIM59Q8IWR1 403 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ADGRG2Q8IZP9 1017 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ANKRD52Q8NB46 1076 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ZBTB44Q8NCP5 570 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 KAT5Q92993 513 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 WBP2Q969T9 261 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 FAM126AQ9BYI3 521 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-213ENST00000527897 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 FAM124BQ9H5Z6 455 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-213ENST00000527897 POLR3BQ9NW08 1133 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-213ENST00000527897 RWDD2AQ9UIY3 292 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 TSPAN16Q9UKR8 245 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 FAM186AA6NE01 2351 aa16.36■□□□□ 0.21
CAPN1-213ENST00000527897 ATG13O75143 517 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 ADH1CP00326 375 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 CALCAP01258 141 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 ADH5P11766 374 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 TDGF1P13385 188 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 PXNP49023 591 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-213ENST00000527897 BCAT1P54687 386 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 GOLGA8FQ08AF8 430 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 GOLGA8DPQ0D2H9 430 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 LPAL2Q16609 132 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 ANO4Q32M45 955 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 LY6G5CQ5SRR4 150 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 MAMSTRQ6ZN01 415 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 MIB1Q86YT6 1006 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 ARHGEF19Q8IW93 802 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 BBS7Q8IWZ6 715 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 RPLP0P6Q8NHW5 317 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 UBA3Q8TBC4 463 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 CNOT6LQ96LI5 555 aaKnown RBP16.35■□□□□ 0.21
CAPN1-213ENST00000527897 NUP62CLQ9H1M0 184 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 SLC8A2Q9UPR5 921 aa16.35■□□□□ 0.21
CAPN1-213ENST00000527897 K7ESF4 209 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 TULP2O00295 520 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 PMM2O15305 246 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 P4HA2O15460 535 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 RALAP11233 206 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 VDRP11473 427 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 OPRD1P41143 372 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 SLC6A11P48066 632 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 TKTL1P51854 596 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 KDSRQ06136 332 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 PDE4CQ08493 712 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 FBXO43Q4G163 708 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 RHBDF2Q6PJF5 856 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 PRR23BQ6ZRT6 265 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
CAPN1-213ENST00000527897 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 SCD5Q86SK9 330 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 NAT16Q8N8M0 369 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 NELL1Q92832 810 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 KLF16Q9BXK1 252 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-213ENST00000527897 INTS2Q9H0H0 1204 aaKnown RBP16.34■□□□□ 0.21
CAPN1-213ENST00000527897 LRRC4Q9HBW1 653 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 CYLDQ9NQC7 956 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.34■□□□□ 0.21
CAPN1-213ENST00000527897 NCDNQ9UBB6 729 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 RASAL2Q9UJF2 1139 aa16.34■□□□□ 0.21
CAPN1-213ENST00000527897 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms