RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 GRIA4P48058 902 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ARL4DP49703 201 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 NT5C2P49902 561 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 FAM160A1Q05DH4 1040 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 SPIRE1Q08AE8 756 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ELAVL2Q12926 359 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 SERINC3Q13530 473 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 TUBB2AQ13885 445 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 RAB33AQ14088 237 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 NCAPHQ15003 741 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ALX1Q15699 326 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 CAMK4Q16566 473 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 LONRF2Q1L5Z9 754 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ADCK5Q3MIX3 580 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 FBXO43Q4G163 708 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 CT47A1Q5JQC4 288 aaPredicted RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 RTP2Q5QGT7 225 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 TSHZ3Q63HK5 1081 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ANO7Q6IWH7 933 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ZNF746Q6NUN9 644 aaPredicted RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 ABHD15Q6UXT9 468 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 LEKR1Q6ZMV7 388 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 SYT13Q7L8C5 426 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 CCDC91Q7Z6B0 441 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 MRPL10Q7Z7H8 261 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 TADA2BQ86TJ2 420 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 SLCO6A1Q86UG4 719 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 RHPN2Q8IUC4 686 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 TMEM139Q8IV31 216 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ENAHQ8N8S7 591 aaPredicted RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 LEMD2Q8NC56 503 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 MNS1Q8NEH6 495 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 OR2I1PQ8NGU4 316 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 CCDC26Q8TAB7 109 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 LNX1Q8TBB1 728 aaPredicted RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 FAM71BQ8TC56 605 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 BICD2Q8TD16 824 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ZFYVE19Q96K21 471 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 NLRP4Q96MN2 994 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ZSWIM3Q96MP5 696 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 JAKMIP1Q96N16 626 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 LGMNQ99538 433 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 EIF3CQ99613 913 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 MXRA8Q9BRK3 442 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 TUBB2BQ9BVA1 445 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 NAT10Q9H0A0 1025 aaKnown RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 GOLPH3LQ9H4A5 285 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 PSTPIP2Q9H939 334 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 VIPAS39Q9H9C1 493 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 PRDM16Q9HAZ2 1276 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 LY9Q9HBG7 655 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 OSGEPQ9NPF4 335 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 ASAH2Q9NR71 780 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 TMEM74BQ9NUR3 256 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
CHD7-205ENST00000527825 SNTG2Q9NY99 539 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 MAD2L2Q9UI95 211 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 RCOR1Q9UKL0 485 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 PCDHA6Q9UN73 950 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 CEP83Q9Y592 693 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 PCDHA8Q9Y5H6 950 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 CDY1Q9Y6F8 540 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 LAMA5O15230 3695 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 SPTA1P02549 2419 aa4.4□□□□□ -1.71
CHD7-205ENST00000527825 PTPN13Q12923 2485 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 A0A087WUV0 522 aaPredicted RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 CCDC196A0A1B0GTZ2 297 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 VWA3AA6NCI4 1184 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 HIP1O00291 1037 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 PLK4O00444 970 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 MEIS2O14770 477 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 SLC27A2O14975 620 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 POLR3GO15318 223 aaPredicted RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 DDX3YO15523 660 aaKnown RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 ZSCAN12O43309 604 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ERLIN2O94905 339 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 SMC2O95347 1197 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 EFEMP2O95967 443 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 EGFP01133 1207 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 MYF5P13349 255 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 GJA1P17302 382 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ITPKAP23677 461 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 LMAN1P49257 510 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 AARSP49588 968 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHD7-205ENST00000527825 GYS2P54840 703 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 UCNP55089 124 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 ARPP19P56211 112 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TMPRSS3P57727 454 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 PTH1RQ03431 593 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 PPP2R3AQ06190 1150 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 DSC1Q08554 894 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 FCHO2Q0JRZ9 810 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 NFATC3Q12968 1075 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 GRIK3Q13003 919 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TRDNQ13061 729 aa4.39□□□□□ -1.71
CHD7-205ENST00000527825 TOB2Q14106 344 aaPredicted RBP4.39□□□□□ -1.71
CHD7-205ENST00000527825 TEAD2Q15562 447 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms