RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 TMEM175Q9BSA9 504 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 EDEM2Q9BV94 578 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 HERC2P3Q9BVR0 1158 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 TRMT61BQ9BVS5 477 aaKnown RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 GCOM2Q9BZD3 368 aaPredicted RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 AGO4Q9HCK5 861 aaKnown RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 VPS45Q9NRW7 570 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 MARCH5Q9NX47 278 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 DNMT3BQ9UBC3 853 aaKnown RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 PIN4Q9Y237 131 aaKnown RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 EFR3BQ9Y2G0 817 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 MSRB2Q9Y3D2 182 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 MRPS23Q9Y3D9 190 aaKnown RBP5.99□□□□□ -1.45
SF3B2-205ENST00000526653 PCDHB2Q9Y5E7 798 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 PIAS3Q9Y6X2 628 aa5.99□□□□□ -1.45
SF3B2-205ENST00000526653 F5P12259 2224 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 PIEZO2Q9H5I5 2752 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 COL1A2P08123 1366 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 A0A087WZ62 844 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 SPAARA0A1B0GVQ0 90 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 A0A1W2PQH9 124 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 hCG_1642624A0A1W2PR95 340 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 ZNF623O75123 536 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 EPN2O95208 641 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 CAVIN2O95810 425 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 RECKO95980 971 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 CCDC192P0DO97 292 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 GDI1P31150 447 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 MPLP40238 635 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 SOX9P48436 509 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 SLC7A5Q01650 507 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 CREB5Q02930 508 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 RTP5Q14D33 572 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 SEC23AQ15436 765 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 USP41Q3LFD5 358 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 PABPC1LQ4VXU2 614 aaKnown RBP5.98□□□□□ -1.45
SF3B2-205ENST00000526653 LIN9Q5TKA1 542 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 DBX2Q6ZNG2 339 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 Q6ZS52 159 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 WDR5BQ86VZ2 330 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 PROSER1Q86XN7 944 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 CEP57Q86XR8 500 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 COLGALT2Q8IYK4 626 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 ZNF654Q8IZM8 581 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 CHCHD4Q8N4Q1 142 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 LZTR1Q8N653 840 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 TTC8Q8TAM2 541 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 LOXL4Q96JB6 756 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 SPATA25Q9BR10 227 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 FDXACB1Q9BRP7 624 aaPredicted RBP5.98□□□□□ -1.45
SF3B2-205ENST00000526653 BDH2Q9BUT1 245 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 COLEC11Q9BWP8 271 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 KRT23Q9C075 422 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 ZNF334Q9HCZ1 680 aaPredicted RBP5.98□□□□□ -1.45
SF3B2-205ENST00000526653 NRBP2Q9NSY0 501 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 MIOSQ9NXC5 875 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 GABBR1Q9UBS5 961 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 NEUROG3Q9Y4Z2 214 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 NFASCO94856 1347 aa5.98□□□□□ -1.45
SF3B2-205ENST00000526653 USP9XQ93008 2570 aaPredicted RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 IFIT3O14879 490 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 DCLK1O15075 740 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 EXTL3O43909 919 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 TADA2AO75478 443 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 PPM1BO75688 479 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 C1RP00736 705 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CAPNS1P04632 268 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 HNRNPA1P09651 372 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 MX1P20591 662 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CSRP1P21291 193 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 VIPR2P41587 438 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 GIPRP48546 466 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 SEPHS1P49903 392 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 SIM1P81133 766 aaPredicted RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 PLP2Q04941 152 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 SCAPQ12770 1279 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 DRP2Q13474 957 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 FAM78AQ5JUQ0 283 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 NT5DC1Q5TFE4 455 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CATSPER4Q7RTX7 472 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 MRPL10Q7Z7H8 261 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 B3GNT8Q7Z7M8 397 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 C19orf47Q8N9M1 422 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 GAB3Q8WWW8 586 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 KLHL6Q8WZ60 621 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 RILPL2Q969X0 211 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 ELSPBP1Q96BH3 223 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 TSPAN17Q96FV3 270 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 PGBD1Q96JS3 809 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CLSTN3Q9BQT9 956 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 SH2D3AQ9BRG2 576 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 IER2Q9BTL4 223 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 CHMP4BQ9H444 224 aaKnown RBP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 RSAD1Q9HA92 442 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 ZFP14Q9HCL3 533 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF3B2-205ENST00000526653 FNIP2Q9P278 1114 aa5.97□□□□□ -1.45
SF3B2-205ENST00000526653 GULP1Q9UBP9 304 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms