RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 MXI1P50539 228 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 MCCD1P59942 119 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 AMPD2Q01433 879 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 NR1H3Q13133 447 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 BECN1Q14457 450 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 DMC1Q14565 340 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
SSBP3-210ENST00000525990 LY6G5CQ5SRR4 150 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 EMC10Q5UCC4 262 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 SNX30Q5VWJ9 437 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 KRT39Q6A163 491 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 CEP68Q76N32 757 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 CCDC33Q8N5R6 958 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 NAT16Q8N8M0 369 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 SPATA20Q8TB22 786 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 USP33Q8TEY7 942 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 INVSQ9Y283 1065 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
SSBP3-210ENST00000525990 A0A1W2PQH9 124 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 GOLGA6L4A6NEF3 574 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 AXIN1O15169 862 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 CETN3O15182 167 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 GDF9O60383 454 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 RPP40O75818 363 aaKnown RBP12.73□□□□□ -0.37
SSBP3-210ENST00000525990 EPB41P11171 864 aaKnown RBP12.73□□□□□ -0.37
SSBP3-210ENST00000525990 ADH5P11766 374 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 BMP6P22004 513 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 RAD23BP54727 409 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 FBXO43Q4G163 708 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 SYT13Q7L8C5 426 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 ZC3H3Q8IXZ2 948 aaKnown RBP12.73□□□□□ -0.37
SSBP3-210ENST00000525990 PHTF2Q8N3S3 785 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 SLC4A11Q8NBS3 891 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 FBXL13Q8NEE6 735 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 SECISBP2LQ93073 1101 aaKnown RBP12.73□□□□□ -0.37
SSBP3-210ENST00000525990 SMARCE1Q969G3 411 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 P2RY11Q96G91 374 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 TPSD1Q9BZJ3 242 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 CYP3A43Q9HB55 503 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 RAB20Q9NX57 234 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 DLL3Q9NYJ7 618 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 MAN1B1Q9UKM7 699 aa12.73□□□□□ -0.37
SSBP3-210ENST00000525990 E2F8A0AVK6 867 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TULP2O00295 520 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 ATG13O75143 517 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 RETP07949 1114 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 CCDC192P0DO97 292 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 GTF2H1P32780 548 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 CNR2P34972 360 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TIE1P35590 1138 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TUBP50607 506 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 NUCB2P80303 420 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 ENPEPQ07075 957 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 LRMPQ12912 555 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 SF3A2Q15428 464 aaKnown RBP12.72□□□□□ -0.37
SSBP3-210ENST00000525990 COBLL1Q53SF7 1204 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 SCD5Q86SK9 330 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 DDX42Q86XP3 938 aaKnown RBP eCLIP12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TMEM25Q86YD3 366 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 ALLCQ8N6M5 410 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
SSBP3-210ENST00000525990 KLF16Q9BXK1 252 aaPredicted RBP12.72□□□□□ -0.37
SSBP3-210ENST00000525990 NACA2Q9H009 215 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 TLR8Q9NR97 1041 aaKnown RBP12.72□□□□□ -0.37
SSBP3-210ENST00000525990 SEMA4GQ9NTN9 838 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 RMND1Q9NWS8 449 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 SH3BP1Q9Y3L3 701 aa12.72□□□□□ -0.37
SSBP3-210ENST00000525990 ADAMTS9Q9P2N4 1935 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 SGK1O00141 431 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 BIN1O00499 593 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 SLC9A3R1O14745 358 aaPredicted RBP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 KAT7O95251 611 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 CALCAP01258 141 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 KIF11P52732 1056 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 PUM1Q14671 1186 aaKnown RBP eCLIP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 PRR23CQ6ZRP0 262 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 ERMP1Q7Z2K6 904 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 DGLUCYQ7Z3D6 616 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 TTC30AQ86WT1 665 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 ETFBKMTQ8IXQ9 262 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 CAMKK1Q8N5S9 505 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 IL17RCQ8NAC3 791 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 ERLEC1Q96DZ1 483 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 PNKPQ96T60 521 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.37
SSBP3-210ENST00000525990 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 FBXO44Q9H4M3 255 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 CYLDQ9NQC7 956 aa12.71□□□□□ -0.37
SSBP3-210ENST00000525990 ARHGEF4Q9NR80 690 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms