RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 GMNCA6NCL1 334 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TMEM8BA6NDV4 472 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 C5orf60A6NFR6 353 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TBKBP1A7MCY6 615 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TMEM110-MUSTN1A8MSY1 372 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 HIDE1A8MVS5 230 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 AKR1B15C9JRZ8 316 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 IFIT3O14879 490 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 NARSO43776 548 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 FOXD2O60548 495 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 HNRNPCL1O60812 293 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 PFDN1O60925 122 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 LRP3O75074 770 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 YEATS4O95619 227 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 GGPS1O95749 300 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CST3P01034 146 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 CHRNA1P02708 482 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PGRP06401 933 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PAEPP09466 180 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PARP1P09874 1014 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 MSL3P1P0C860 447 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 ACADSP16219 412 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PRLRP16471 622 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 LAG3P18627 525 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 S100A1P23297 94 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SLC16A2P36021 539 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 MDH1P40925 334 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 RASSF2P50749 326 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 AK2P54819 239 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 KRT83P78385 493 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 ATP8B2P98198 1209 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PDE1BQ01064 536 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TFAP4Q01664 338 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SULT2A1Q06520 285 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 MYO1EQ12965 1108 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PAK2Q13177 524 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 IKZF1Q13422 519 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 LPIN1Q14693 890 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CLPPQ16740 277 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 CCDC153Q494R4 210 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SPDYCQ5MJ68 293 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CELF3Q5SZQ8 465 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 IRGCQ6NXR0 463 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TAF2Q6P1X5 1199 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CCNI2Q6ZMN8 369 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 ZNF574Q6ZN55 896 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 RUFY3Q7L099 469 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 TMEM110Q86TL2 294 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CABP7Q86V35 215 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 RELL1Q8IUW5 271 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 IFT20Q8IY31 132 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 MFSD4AQ8N468 514 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 C12orf76Q8N812 135 aaPredicted RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 COLGALT1Q8NBJ5 622 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 MYCBPAPQ8TBZ2 947 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 PI4K2BQ8TCG2 481 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 DCAF4Q8WV16 495 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CLEC4DQ8WXI8 215 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 NAF1Q96HR8 494 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 CCT8L2Q96SF2 557 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SLX1AQ9BQ83 275 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 CENPKQ9BS16 269 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SELENOOQ9BVL4 669 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 YIPF3Q9GZM5 350 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 EPC1Q9H2F5 836 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 ZSWIM4Q9H7M6 989 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 EHMT1Q9H9B1 1298 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SETD4Q9NVD3 440 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 ADAM30Q9UKF2 790 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SH3GLB1Q9Y371 365 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SAR1BQ9Y6B6 198 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SETXQ7Z333 2677 aaKnown RBP5.32□□□□□ -1.56
CD44-218ENST00000525469 ADAMTS20P59510 1910 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 GREB1Q4ZG55 1949 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SPAG17Q6Q759 2223 aa5.32□□□□□ -1.56
CD44-218ENST00000525469 SDK1Q7Z5N4 2213 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 ITIH6Q6UXX5 1313 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 TSPY2A6NKD2 308 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 ASAP2O43150 1006 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 KRT86O43790 486 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 CLASP2O75122 1294 aaKnown RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 LGALS2P05162 132 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 RPLP2P05387 115 aaKnown RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 PYGLP06737 847 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 ZFYP08048 801 aaPredicted RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 RPSAP08865 295 aaKnown RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 IFIT2P09913 472 aaKnown RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 CCDC159P0C7I6 412 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 C1QTNF9P0C862 333 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 FAM200BP0CF97 657 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 SRFP11831 508 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 MYCLP12524 364 aaPredicted RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 TFE3P19532 575 aaPredicted RBP5.31□□□□□ -1.56
CD44-218ENST00000525469 NR1D1P20393 614 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 CALB2P22676 271 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 CD52P31358 61 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 PPM1AP35813 382 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 ETV3P41162 512 aa5.31□□□□□ -1.56
CD44-218ENST00000525469 KIR3DL1P43629 444 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms