RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 SGO2Q562F6 1265 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TMEM196Q5HYL7 178 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 PIGZQ86VD9 579 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 IRF2BP1Q8IU81 584 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 ADGRG2Q8IZP9 1017 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 ANKRD52Q8NB46 1076 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TFAP2BQ92481 460 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 NKD2Q969F2 451 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 P2RY13Q9BPV8 354 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 CRACR2AQ9BSW2 395 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 INTS2Q9H0H0 1204 aaKnown RBP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 FAM124BQ9H5Z6 455 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 PNPLA8Q9NP80 782 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 TSPAN16Q9UKR8 245 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 SH3BP1Q9Y3L3 701 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 F5P12259 2224 aa13.54□□□□□ -0.24
TRAPPC4-205ENST00000525079 PRR23AA6NEV1 266 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 CYP17A1P05093 508 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 VDRP11473 427 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 CXCL12P48061 93 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 TUBP50607 506 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 PDE4CQ08493 712 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 HSP90AA4PQ58FG1 418 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 DDX42Q86XP3 938 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 SPEM1Q8N4L4 309 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 GPT2Q8TD30 523 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 CD101Q93033 1021 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 KREMEN1Q96MU8 473 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 GBP4Q96PP9 640 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 PRMT8Q9NR22 394 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 NAGPAQ9UK23 515 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
TRAPPC4-205ENST00000525079 E2F8A0AVK6 867 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 SLC9A3R1O14745 358 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 BRD2P25440 801 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 ATP5C1P36542 298 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 OPRD1P41143 372 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 CCR3P51677 355 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 TKTL1P51854 596 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 SLC8A3P57103 927 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 APBA1Q02410 837 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 DHCR24Q15392 516 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 GAB4Q2WGN9 574 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZNF528Q3MIS6 628 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 C10orf120Q5SQS8 335 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 GJB7Q6PEY0 223 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZC3H14Q6PJT7 736 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 BBS7Q8IWZ6 715 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 RBBP8NLQ8NC74 664 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 EZH1Q92800 747 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZSWIM1Q9BR11 485 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 KLF16Q9BXK1 252 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 UBXN6Q9BZV1 441 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 CYLDQ9NQC7 956 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 HESX1Q9UBX0 185 aa13.52□□□□□ -0.25
TRAPPC4-205ENST00000525079 CACNA1HO95180 2353 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 ANTXRLA6NF34 631 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 O00370 1275 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 PIK3R2O00459 728 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 XPO1O14980 1071 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 RNF40O75150 1001 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 PAEPP09466 180 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 TDGF1P13385 188 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 KRT5P13647 590 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 SLC9A1P19634 815 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 SLC6A11P48066 632 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 RGS7P49802 495 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 BCAT1P54687 386 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 DMWDQ09019 674 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 BST2Q10589 180 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 LY6G5CQ5SRR4 150 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 HEATR6Q6AI08 1181 aaKnown RBP13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 MIB1Q86YT6 1006 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 SYNPOQ8N3V7 929 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 IER2Q9BTL4 223 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 ULBP1Q9BZM6 244 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 LRRC4Q9HBW1 653 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZSCAN32Q9NX65 697 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 TBC1D14Q9P2M4 693 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 KIAA1257Q9ULG3 409 aa13.51□□□□□ -0.25
TRAPPC4-205ENST00000525079 CHURC1-FNTBB4DL54 471 aa13.5□□□□□ -0.25
TRAPPC4-205ENST00000525079 ZBED1O96006 694 aa13.5□□□□□ -0.25
TRAPPC4-205ENST00000525079 LMNAP02545 664 aaKnown RBP13.5□□□□□ -0.25
TRAPPC4-205ENST00000525079 HMBSP08397 361 aa13.5□□□□□ -0.25
TRAPPC4-205ENST00000525079 RALAP11233 206 aa13.5□□□□□ -0.25
TRAPPC4-205ENST00000525079 LCP1P13796 627 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms