RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 RNF10Q8N5U6 811 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 JOSD2Q8TAC2 188 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 PSMG2Q969U7 264 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 CALR3Q96L12 384 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 TRIM62Q9BVG3 475 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 TTLL2Q9BWV7 592 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 IGFLR1Q9H665 355 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 IL37Q9NZH6 218 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 SALL4Q9UJQ4 1053 aa16.61■□□□□ 0.25
TSPAN4-213ENST00000524895 FAM92AA1XBS5 289 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TMEM191CA6NGB0 347 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 CCL16O15467 120 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 KIF5CO60282 957 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 DAB1O75553 588 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 LTFP02788 710 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 HNRNPA1P09651 372 aaKnown RBP eCLIP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 SRGAP2BP0DMP2 458 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 HOXA9P31269 272 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 RFC1P35251 1148 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 HADHBP55084 474 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 RPL7AP62424 266 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TAF10Q12962 218 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TCEAL5Q5H9L2 206 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 BHLHA9Q7RTU4 235 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 DNAJB7Q7Z6W7 309 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 EMC1Q8N766 993 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 PDZD8Q8NEN9 1154 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 CASP10Q92851 521 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TRMT2BQ96GJ1 504 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 LRCH3Q96II8 777 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 ZNF512Q96ME7 567 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 ALS2CR12Q96Q35 445 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 POPDC2Q9HBU9 364 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 DZANK1Q9NVP4 752 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 GMIPQ9P107 970 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 UXTQ9UBK9 157 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TMEM59LQ9UK28 342 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
TSPAN4-213ENST00000524895 A0A1W2PQH9 124 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 TMEM110-MUSTN1A8MSY1 372 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 MYO1FO00160 1098 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 CAPN9O14815 690 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 XYLBO75191 536 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 RFPL2O75678 378 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 HMGA1P17096 107 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 DESP17661 470 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 GPD1P21695 349 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 GTF2F1P35269 517 aaKnown RBP eCLIP16.59■□□□□ 0.256e-7■■■■■ 38.6
TSPAN4-213ENST00000524895 FLT3P36888 993 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 HYAL1Q12794 435 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 BTBD8Q5XKL5 378 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 ARCQ7LC44 396 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 MON1AQ86VX9 555 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 TPCN2Q8NHX9 752 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 OVCA2Q8WZ82 227 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 BTBD6Q96KE9 485 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 MYRFLQ96LU7 910 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 TRIM7Q9C029 511 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■□□ 18.3
TSPAN4-213ENST00000524895 CAPN6Q9Y6Q1 641 aa16.59■□□□□ 0.25
TSPAN4-213ENST00000524895 C2CD4BA6NLJ0 364 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 PDGFRAP16234 1089 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 PSMA2P25787 234 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 SDC4P31431 198 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 PSEN1P49768 467 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 MESDQ14696 234 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 BSPRYQ5W0U4 402 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 DAAM2Q86T65 1068 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 DEFB106AQ8N104 65 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 EFHBQ8N7U6 833 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 VN1R2Q8NFZ6 395 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 EDEM1Q92611 657 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 KHSRPQ92945 711 aaKnown RBP eCLIP16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 FAM161BQ96MY7 647 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 SLC2A13Q96QE2 648 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 GAS2L1Q99501 681 aaPredicted RBP16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 SFXN1Q9H9B4 322 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 NMUR1Q9HB89 426 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 ASAH2Q9NR71 780 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 ABCC13Q9NSE7 274 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 IP6K2Q9UHH9 426 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 MTCH2Q9Y6C9 303 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 GREB1Q4ZG55 1949 aa16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 MTCL1Q9Y4B5 1905 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-213ENST00000524895 ESPNB1AK53 854 aa16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 DPYSL4O14531 572 aa16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 PALMO75781 387 aa16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 NCAM1P13591 858 aa16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 IGFBP4P22692 258 aa16.57■□□□□ 0.24
TSPAN4-213ENST00000524895 MATKP42679 507 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms