RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 SCML2Q9UQR0 700 aa10.04□□□□□ -0.8
PABPC1-222ENST00000523555 USP3Q9Y6I4 520 aa10.04□□□□□ -0.8
PABPC1-222ENST00000523555 R4GN57 208 aa10.04□□□□□ -0.8
PABPC1-222ENST00000523555 FRYLO94915 3013 aa10.04□□□□□ -0.8
PABPC1-222ENST00000523555 PIK3R2O00459 728 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 GREM1O60565 184 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 EGFP01133 1207 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 CYP17A1P05093 508 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 VDRP11473 427 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 PFKLP17858 780 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 RPS9P46781 194 aaKnown RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 MRE11P49959 708 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 ZNF132P52740 706 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 MLLT6P55198 1093 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 SATB1Q01826 763 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 SGO2Q562F6 1265 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 MIIPQ5JXC2 388 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 DPY19L2P1Q6NXN4 242 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 CC2D1AQ6P1N0 951 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 TRIM65Q6PJ69 517 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 C11orf57Q6ZUT1 292 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 ASCL5Q7RTU5 278 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 CCDC186Q7Z3E2 898 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 C12orf40Q86WS4 652 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 SFTPA1Q8IWL2 248 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 ANKRD52Q8NB46 1076 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 RBBP8NLQ8NC74 664 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 P2RY11Q96G91 374 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 NELL2Q99435 816 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 KLF16Q9BXK1 252 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 ULBP1Q9BZM6 244 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 FBXO44Q9H4M3 255 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 SIX2Q9NPC8 291 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 CYLDQ9NQC7 956 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 TLR8Q9NR97 1041 aaKnown RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 MRPS17Q9Y2R5 130 aaKnown RBP10.03□□□□□ -0.8
PABPC1-222ENST00000523555 CFAP54Q96N23 3096 aa10.03□□□□□ -0.8
PABPC1-222ENST00000523555 BECN2A8MW95 431 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 FGFR1OPO95684 399 aaKnown RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 PNMA6AP0CW24 399 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TDGF1P13385 188 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 RARGP13631 454 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 PON1P27169 355 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 OPRD1P41143 372 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 NBL1P41271 181 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 MTIF2P46199 727 aaKnown RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 RGS7P49802 495 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TUBP50607 506 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 PDE6CP51160 858 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 GALK1P51570 392 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 GCNT1Q02742 428 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 CSTF1Q05048 431 aaKnown RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 DMWDQ09019 674 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 ADIGQ0VDE8 80 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TPD52L1Q16890 204 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TMEM196Q5HYL7 178 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 RHBDF2Q6PJF5 856 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 BBS7Q8IWZ6 715 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 ADGRG2Q8IZP9 1017 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TTC39CQ8N584 583 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 CLEC4CQ8WTT0 213 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 SECISBP2LQ93073 1101 aaKnown RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 ATP2A3Q93084 1043 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 MSANTD3Q96H12 275 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 FAM124BQ9H5Z6 455 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 UBE2TQ9NPD8 197 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 PRMT8Q9NR22 394 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 TMEM63CQ9P1W3 806 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 NAGPAQ9UK23 515 aa10.02□□□□□ -0.81
PABPC1-222ENST00000523555 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.02□□□□□ -0.81
PABPC1-222ENST00000523555 M0QYV0 167 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 TRDMT1O14717 391 aaKnown RBP10.01□□□□□ -0.81
PABPC1-222ENST00000523555 NCAM2O15394 837 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 LAMTOR5O43504 91 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 PAEPP09466 180 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 TRIM21P19474 475 aaKnown RBP10.01□□□□□ -0.81
PABPC1-222ENST00000523555 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
PABPC1-222ENST00000523555 MAGEA9P43362 315 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 SLC6A11P48066 632 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 TKTL1P51854 596 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 BCAT1P54687 386 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 YWHAEP62258 255 aaKnown RBP10.01□□□□□ -0.81
PABPC1-222ENST00000523555 BST2Q10589 180 aaKnown RBP10.01□□□□□ -0.81
PABPC1-222ENST00000523555 KCNMA1Q12791 1236 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 CETN1Q12798 172 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 DHCR24Q15392 516 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 MAN2A1Q16706 1144 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 ARHGAP44Q17R89 818 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 PMF1Q6P1K2 205 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 LCLAT1Q6UWP7 414 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 CPA6Q8N4T0 437 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 UBXN6Q9BZV1 441 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 CYTH4Q9UIA0 394 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 CNTN6Q9UQ52 1028 aa10.01□□□□□ -0.81
PABPC1-222ENST00000523555 E2F8A0AVK6 867 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms