RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SRRTQ9BXP5 876 aaKnown RBP18.2■□□□□ 0.5
CCNC-213ENST00000523541 NACA2Q9H009 215 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 LINC00597Q9H2U6 94 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 SMPD4Q9NXE4 827 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 CLIC5Q9NZA1 410 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 GMIPQ9P107 970 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 CTNND2Q9UQB3 1225 aa18.2■□□□□ 0.5
CCNC-213ENST00000523541 ANAPC1Q9H1A4 1944 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 CHURC1-FNTBB4DL54 471 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 TLR5O60602 858 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 LILRB5O75023 590 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 ACO1P21399 889 aaKnown RBP18.19■□□□□ 0.5
CCNC-213ENST00000523541 CNR2P34972 360 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 ATP5C1P36542 298 aaKnown RBP18.19■□□□□ 0.5
CCNC-213ENST00000523541 EIF2DP41214 584 aaKnown RBP18.19■□□□□ 0.5
CCNC-213ENST00000523541 GOLGA8FQ08AF8 430 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 GOLGA8DPQ0D2H9 430 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 CAMK4Q16566 473 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 KIAA2013Q8IYS2 634 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 ARHGAP18Q8N392 663 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 EHBP1Q8NDI1 1231 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 CD101Q93033 1021 aa18.19■□□□□ 0.5
CCNC-213ENST00000523541 SMG5Q9UPR3 1016 aaKnown RBP18.19■□□□□ 0.5
CCNC-213ENST00000523541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCNC-213ENST00000523541 RIF1Q5UIP0 2472 aaKnown RBP18.18■□□□□ 0.5
CCNC-213ENST00000523541 AFPP02771 609 aaKnown RBP18.18■□□□□ 0.5
CCNC-213ENST00000523541 PAEPP09466 180 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 VDRP11473 427 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 TDGF1P13385 188 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 GCNT1Q02742 428 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 KCNH2Q12809 1159 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 GAS6Q14393 721 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 STILQ15468 1287 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 PREPLQ4J6C6 727 aaPredicted RBP18.18■□□□□ 0.5
CCNC-213ENST00000523541 SGO2Q562F6 1265 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 CT47A1Q5JQC4 288 aaPredicted RBP18.18■□□□□ 0.5
CCNC-213ENST00000523541 FSTL4Q6MZW2 842 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 PRR23BQ6ZRT6 265 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 LMO3Q8TAP4 145 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 CHFRQ96EP1 664 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 ZFRQ96KR1 1074 aaKnown RBP18.18■□□□□ 0.5
CCNC-213ENST00000523541 FAM81BQ96LP2 452 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 ARID3AQ99856 593 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 CCSER2Q9H7U1 834 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 CFAP97Q9P2B7 532 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 SH3BP1Q9Y3L3 701 aa18.18■□□□□ 0.5
CCNC-213ENST00000523541 CCDC163A0A0D9SF12 145 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 ADH1CP00326 375 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 RALAP11233 206 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 PLA2G4AP47712 749 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 STX17P56962 302 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 RAB41Q5JT25 222 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 HTR3DQ70Z44 454 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 DCLK2Q8N568 766 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 UBR7Q8N806 425 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 CLSTN2Q9H4D0 955 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCNC-213ENST00000523541 HESX1Q9UBX0 185 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 DNMT3LQ9UJW3 386 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 GMEB2Q9UKD1 530 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 SLC8A2Q9UPR5 921 aa18.17■□□□□ 0.5
CCNC-213ENST00000523541 PTPRZ1P23471 2315 aaPredicted RBP18.17■□□□□ 0.5
CCNC-213ENST00000523541 WDR87Q6ZQQ6 2873 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 A0A0A0MRY4 1105 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 SCAMP3O14828 347 aaKnown RBP18.16■□□□□ 0.5
CCNC-213ENST00000523541 FNTBP49356 437 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 BCAT1P54687 386 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 DHCR24Q15392 516 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 LPAL2Q16609 132 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 PM20D1Q6GTS8 502 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 GPRIN1Q7Z2K8 1008 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 CAMKK1Q8N5S9 505 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 SUMF1Q8NBK3 374 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 KLF16Q9BXK1 252 aaPredicted RBP18.16■□□□□ 0.5
CCNC-213ENST00000523541 EPC1Q9H2F5 836 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 DACH1Q9UI36 760 aa18.16■□□□□ 0.5
CCNC-213ENST00000523541 FANCMQ8IYD8 2048 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.15■□□□□ 0.5
CCNC-213ENST00000523541 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
CCNC-213ENST00000523541 RNF40O75150 1001 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 EGFP01133 1207 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 RARGP13631 454 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 COG7P83436 770 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 GAD2Q05329 585 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 BST2Q10589 180 aaKnown RBP18.15■□□□□ 0.5
CCNC-213ENST00000523541 CNGA2Q16280 664 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 RHBDF2Q6PJF5 856 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 LCLAT1Q6UWP7 414 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 CEP68Q76N32 757 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 ENOSF1Q7L5Y1 443 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 PIGZQ86VD9 579 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 LONP2Q86WA8 852 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 SCML4Q8N228 414 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 PPM1KQ8N3J5 372 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 KCTD13Q8WZ19 329 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 FBRSL1Q9HCM7 1045 aaKnown RBP18.15■□□□□ 0.5
CCNC-213ENST00000523541 LSM7Q9UK45 103 aaKnown RBP18.15■□□□□ 0.5
CCNC-213ENST00000523541 TSPAN16Q9UKR8 245 aa18.15■□□□□ 0.5
CCNC-213ENST00000523541 ZNF510Q9Y2H8 683 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms