RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 AFF3P51826 1226 aaKnown RBP14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 RAD51AP2Q09MP3 1159 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 USP49Q70CQ1 688 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 OSTM1Q86WC4 334 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 DDX42Q86XP3 938 aaKnown RBP eCLIP14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 TTC9Q92623 222 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 TTLL2Q9BWV7 592 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 ASB7Q9H672 318 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 LRWD1Q9UFC0 647 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 KCNG1Q9UIX4 513 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 PCDHB6Q9Y5E3 794 aa14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 SPTAN1Q13813 2472 aaKnown RBP14.82□□□□□ -0.04
NKX3-1-202ENST00000523261 FLNCQ14315 2725 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 WASH3PC4AMC7 463 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 PRRT4C9JH25 899 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 KCNK3O14649 394 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 HNRNPDLO14979 420 aaKnown RBP14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 HCRTO43612 131 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 PIGRP01833 764 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 ACTN2P35609 894 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 MYL7Q01449 175 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 ZNF174Q15697 407 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 TBC1D25Q3MII6 688 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 HES3Q5TGS1 186 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 GRAMD4Q6IC98 578 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 DENND5BQ6ZUT9 1274 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 KCNK18Q7Z418 384 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 TMEM25Q86YD3 366 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 SNX29Q8TEQ0 813 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 KCNN1Q92952 543 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 IGSF8Q969P0 613 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 MED8Q96G25 268 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 ZNF560Q96MR9 790 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 MSTO1Q9BUK6 570 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 CPNE5Q9HCH3 593 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 SPHK2Q9NRA0 654 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 IL17BQ9UHF5 180 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 ANKRD6Q9Y2G4 727 aa14.81□□□□□ -0.04
NKX3-1-202ENST00000523261 H0Y8X5 98 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 GFRA2O00451 464 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 ENC1O14682 589 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 PAPSS1O43252 624 aaPredicted RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 PFKFB2O60825 505 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 RFPL3O75679 317 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 C1SP09871 688 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 MBL2P11226 248 aaPredicted RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 CDK4P11802 303 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 GRIK1P39086 918 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 PPP3CCP48454 512 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 TPMTP51580 245 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 NCKAP1LP55160 1127 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 TMPRSS3P57727 454 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 ANO4Q32M45 955 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 INAVAQ3KP66 663 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 FUT11Q495W5 492 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 ARHGAP40Q5TG30 622 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 SLC39A4Q6P5W5 647 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 FBXL19Q6PCT2 694 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 TMEM86AQ8N2M4 240 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 ZFRQ96KR1 1074 aaKnown RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 CEP295NLQ96MC4 621 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 LGMNQ99538 433 aa14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 MKRN2Q9H000 416 aaKnown RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 DNAJC17Q9NVM6 304 aaKnown RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 NXF1Q9UBU9 619 aaKnown RBP14.8□□□□□ -0.04
NKX3-1-202ENST00000523261 CBX4O00257 560 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 HUS1O60921 280 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 ABL1P00519 1130 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 IGLV3-19P01714 112 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 KRT10P13645 584 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 OXTRP30559 389 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 ACOT2P49753 483 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 UCNP55089 124 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 DNAJC3Q13217 504 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 FAM171BQ6P995 826 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 VSTM1Q6UX27 236 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 BBS7Q8IWZ6 715 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 SCFD1Q8WVM8 642 aa14.79□□□□□ -0.04
NKX3-1-202ENST00000523261 NOTCH2Q04721 2471 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 AHCTF1Q8WYP5 2266 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 H0YCG3 227 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 GABRDO14764 452 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 PNPLA4P41247 253 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 GRIA4P48058 902 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 ACADVLP49748 655 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 FOSBP53539 338 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 IL9RQ01113 521 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 TEAD4Q15561 434 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 KCNT1Q5JUK3 1230 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 PRICKLE2Q7Z3G6 844 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 IGSF22Q8N9C0 903 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 ZNF248Q8NDW4 579 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 DUSP9Q99956 384 aaKnown RBP14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 TRIM4Q9C037 500 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 OSGEPQ9NPF4 335 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 LRRK2Q5S007 2527 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 NUMA1Q14980 2115 aa14.78□□□□□ -0.04
NKX3-1-202ENST00000523261 PP2D1A8MPX8 630 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms