RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 DDX42Q86XP3 938 aaKnown RBP eCLIP19.73■□□□□ 0.75
SPIDR-220ENST00000522900 SFTPA1Q8IWL2 248 aa19.73■□□□□ 0.75
SPIDR-220ENST00000522900 RPLP0P6Q8NHW5 317 aa19.73■□□□□ 0.75
SPIDR-220ENST00000522900 NELFBQ8WX92 580 aa19.73■□□□□ 0.75
SPIDR-220ENST00000522900 TLR8Q9NR97 1041 aaKnown RBP19.73■□□□□ 0.75
SPIDR-220ENST00000522900 NCDNQ9UBB6 729 aa19.73■□□□□ 0.75
SPIDR-220ENST00000522900 NUDT5Q9UKK9 219 aa19.73■□□□□ 0.75
SPIDR-220ENST00000522900 FAM186AA6NE01 2351 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 A0A1W2PQH9 124 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 K7EQS6 105 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 SLC9A3R1O14745 358 aaPredicted RBP19.72■□□□□ 0.75
SPIDR-220ENST00000522900 TLR5O60602 858 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 ATG13O75143 517 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 IRF1P10914 325 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 KIF11P52732 1056 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 FBXO43Q4G163 708 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 SCD5Q86SK9 330 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 C12orf40Q86WS4 652 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 EXOC4Q96A65 974 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 CEP63Q96MT8 703 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 KLF16Q9BXK1 252 aaPredicted RBP19.72■□□□□ 0.75
SPIDR-220ENST00000522900 PNPLA8Q9NP80 782 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 SH3BP1Q9Y3L3 701 aa19.72■□□□□ 0.75
SPIDR-220ENST00000522900 GPR179Q6PRD1 2367 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 GREM1O60565 184 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 FMO5P49326 533 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 SEC13P55735 322 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 STX17P56962 302 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 CUL2Q13617 745 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 LY6G5CQ5SRR4 150 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 PRR23BQ6ZRT6 265 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 WDR5BQ86VZ2 330 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 BBS7Q8IWZ6 715 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 TTC39CQ8N584 583 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 NACA2Q9H009 215 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 METTL14Q9HCE5 456 aaKnown RBP19.71■□□□□ 0.75
SPIDR-220ENST00000522900 TBC1D14Q9P2M4 693 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 SLC8A2Q9UPR5 921 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 CTNND2Q9UQB3 1225 aa19.71■□□□□ 0.75
SPIDR-220ENST00000522900 HELZP42694 1942 aaKnown RBP19.7■□□□□ 0.74
SPIDR-220ENST00000522900 EP300Q09472 2414 aaPredicted RBP19.7■□□□□ 0.74
SPIDR-220ENST00000522900 MDM4O15151 490 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 RARGP13631 454 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 PPP1R2P41236 205 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 SIM2Q14190 667 aaPredicted RBP19.7■□□□□ 0.74
SPIDR-220ENST00000522900 CCDC40Q4G0X9 1142 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 ARHGAP17Q68EM7 881 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 DNAI2Q9GZS0 605 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 CYLDQ9NQC7 956 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 USP3Q9Y6I4 520 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 GVINP1Q7Z2Y8 2422 aa19.7■□□□□ 0.74
SPIDR-220ENST00000522900 TULP2O00295 520 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 ADH5P11766 374 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 TGM1P22735 817 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 ATP5C1P36542 298 aaKnown RBP19.69■□□□□ 0.74
SPIDR-220ENST00000522900 CAMK4Q16566 473 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 C2orf27AQ580R0 203 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 TTC30AQ86WT1 665 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 TMEM25Q86YD3 366 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 UBR7Q8N806 425 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 USP33Q8TEY7 942 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 HHIPQ96QV1 700 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.69■□□□□ 0.74
SPIDR-220ENST00000522900 NAGPAQ9UK23 515 aa19.69■□□□□ 0.74
SPIDR-220ENST00000522900 OTOGLQ3ZCN5 2332 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 ADH1CP00326 375 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 CNR2P34972 360 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 DMC1Q14565 340 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 EMC10Q5UCC4 262 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 HTR3DQ70Z44 454 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 SYT13Q7L8C5 426 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 CCDC186Q7Z3E2 898 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 PIGZQ86VD9 579 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 NAT16Q8N8M0 369 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 ANKRD52Q8NB46 1076 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 LMO3Q8TAP4 145 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 KAT5Q92993 513 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 OTUB2Q96DC9 234 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 PNKPQ96T60 521 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 UBXN6Q9BZV1 441 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 FAM124BQ9H5Z6 455 aaPredicted RBP19.68■□□□□ 0.74
SPIDR-220ENST00000522900 PARD6AQ9NPB6 346 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 CHMP5Q9NZZ3 219 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 RAB23Q9ULC3 237 aa19.68■□□□□ 0.74
SPIDR-220ENST00000522900 DMXL1Q9Y485 3027 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 BICDL2A1A5D9 508 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 PMM2O15305 246 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 KAT7O95251 611 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 CHRM1P11229 460 aaPredicted RBP19.67■□□□□ 0.74
SPIDR-220ENST00000522900 ID4P47928 161 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 UBE2HP62256 183 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 GAD2Q05329 585 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 GOLGA7BQ2TAP0 167 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 RAB41Q5JT25 222 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 C10orf120Q5SQS8 335 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 LAIR1Q6GTX8 287 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 PHTF2Q8N3S3 785 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 CCDC33Q8N5R6 958 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 CAMKK1Q8N5S9 505 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 NDRG1Q92597 394 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms