RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
RAB11FIP1-204ENST00000522774 CENPFP49454 3210 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 RALGAPA2Q2PPJ7 1873 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 GOLGA8RI6L899 631 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 STRNO43815 780 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 AKAP5P24588 427 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 STIP1P31948 543 aaKnown RBP11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SLC18A1P54219 525 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 YARSP54577 528 aaKnown RBP11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 HDAC4P56524 1084 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 STILQ15468 1287 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 DGKDQ16760 1214 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 SOWAHAQ2M3V2 549 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FAXCQ5TGI0 409 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TBC1D1Q86TI0 1168 aaPredicted RBP11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 TMEM110Q86TL2 294 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 FAM228AQ86W67 206 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PPCSQ9HAB8 311 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 PHTF1Q9UMS5 762 aa11.21□□□□□ -0.61
RAB11FIP1-204ENST00000522774 KBTBD13C9JR72 458 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KCNN4O15554 427 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RBL1P28749 1068 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SDC4P31431 198 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RDXP35241 583 aaKnown RBP11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 BNIP1Q12981 228 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 GRB14Q14449 540 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 HIC1Q14526 733 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PDK4Q16654 411 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 LVRNQ6Q4G3 990 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 C7orf31Q8N865 590 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 FAF2Q96CS3 445 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TINF2Q9BSI4 451 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 FAM124BQ9H5Z6 455 aaPredicted RBP11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PLEKHA5Q9HAU0 1116 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RAB6BQ9NRW1 208 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 FETUBQ9UGM5 382 aa11.21□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 APOL1O14791 398 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RECQL4O94761 1208 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 CCDC130P13994 396 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KCNJ2P63252 427 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 BOLA3Q53S33 107 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PPP6R3Q5H9R7 873 aaPredicted RBP11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PRAMEF19Q5SWL8 479 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 LENG1Q96BZ8 264 aaPredicted RBP11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 GCOM2Q9BZD3 368 aaPredicted RBP11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RXFP1Q9HBX9 757 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KLHL14Q9P2G3 628 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TEX264Q9Y6I9 313 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 DNAH12Q6ZR08 3092 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TCRBV9S1A1TA0A576 114 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 A8MXQ7 604 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 MGRN1O60291 552 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ADRA1DP25100 572 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 MSH2P43246 934 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 BCAR1P56945 870 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 PDK2Q15119 407 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ZNF618Q5T7W0 954 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 C9orf57Q5W0N0 161 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RNF43Q68DV7 783 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SLC9A4Q6AI14 798 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SESTD1Q86VW0 696 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 MAP7D3Q8IWC1 876 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 CCDC33Q8N5R6 958 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 BEST2Q8NFU1 509 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TEKT4Q8WW24 435 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SYT17Q9BSW7 474 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ABHD16BQ9H3Z7 469 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 HESX1Q9UBX0 185 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TRIM33Q9UPN9 1127 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 DERAQ9Y315 318 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 STARD13Q9Y3M8 1113 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SMAPO00193 183 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SPTLC1O15269 473 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SMIM10L2AP0DMW4 78 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SMIM10L2BP0DMW5 78 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 LMO2P25791 158 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ADORA2BP29275 332 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ALKAL1Q6UXT8 129 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 RGS9BPQ6ZS82 235 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 LRRC8CQ8TDW0 803 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 KBTBD7Q8WVZ9 684 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TMEM40Q8WWA1 233 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 GRAMD1AQ96CP6 724 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SLC17A7Q9P2U7 560 aa11.2□□□□□ -0.62
RAB11FIP1-204ENST00000522774 CHADO15335 359 aa11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 EDF1O60869 148 aaKnown RBP11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SETSIPP0DME0 302 aa11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 TGM2P21980 687 aa11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 YWHAGP61981 247 aaKnown RBP eCLIP11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 YWHAZP63104 245 aaKnown RBP11.19□□□□□ -0.62
RAB11FIP1-204ENST00000522774 SNCBQ16143 134 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms