RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 MMS19Q96T76 1030 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 ELOVL4Q9GZR5 314 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 FSCN3Q9NQT6 498 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 SPHK2Q9NRA0 654 aa12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 CHORDC1Q9UHD1 332 aaPredicted RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 SMG1Q96Q15 3661 aaKnown RBP12.23□□□□□ -0.45
IGHV3-60-201ENST00000521678 HELZ2Q9BYK8 2649 aaKnown RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 A0A087X0B3 334 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 IGHV1OR15-9A0A0B4J2B8 117 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 A0A1W2PQD8 194 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 GREM1O60565 184 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 OPHN1O60890 802 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF217O75362 1048 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 RTN3O95197 1032 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 TUBP50607 506 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 ATXN3P54252 364 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 KDSRQ06136 332 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 HECTD3Q5T447 861 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 PAQR9Q6ZVX9 377 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 HS2ST1Q7LGA3 356 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 PGBD3Q8N328 593 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 MINDY1Q8N5J2 469 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 NAT16Q8N8M0 369 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 TERB1Q8NA31 727 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 GLIS3Q8NEA6 775 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 OR6B3Q8NGW1 331 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 GZF1Q9H116 711 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 XYLT2Q9H1B5 865 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 HSPBP1Q9NZL4 362 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 MYO18AQ92614 2054 aaKnown RBP12.22□□□□□ -0.45
IGHV3-60-201ENST00000521678 TNRC6BQ9UPQ9 1833 aaKnown RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ATXN2Q99700 1313 aaKnown RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 CLDN5O00501 218 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 TRIM24O15164 1050 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 TGFB1I1O43294 461 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 SYPP08247 313 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 PSMD6Q15008 389 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 TRIP6Q15654 476 aaKnown RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 WDR72Q3MJ13 1102 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 BTBD8Q5XKL5 378 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 HTR3DQ70Z44 454 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 EPM2AIP1Q7L775 607 aaPredicted RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 BBS7Q8IWZ6 715 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 DEFB119Q8N690 84 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 B3GALNT2Q8NCR0 500 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF507Q8TCN5 953 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 NOC3LQ8WTT2 800 aaKnown RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ADAMTS14Q8WXS8 1223 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZNF516Q92618 1163 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 FBXO32Q969P5 355 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ACOX2Q99424 681 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 GABRG3Q99928 467 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 GTPBP2Q9BX10 602 aaKnown RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 PANK2Q9BZ23 570 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 VRTNQ9H8Y1 702 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 GPSM3Q9Y4H4 160 aa12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.21□□□□□ -0.45
IGHV3-60-201ENST00000521678 PLXND1Q9Y4D7 1925 aa12.21□□□□□ -0.46
IGHV3-60-201ENST00000521678 CELSR3Q9NYQ7 3312 aa12.21□□□□□ -0.46
IGHV3-60-201ENST00000521678 APC2O95996 2303 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 KALRNO60229 2985 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 SH3BP5O60239 455 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 HOXB2P14652 356 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 NDUFV2P19404 249 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 TXLNAP40222 546 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 PGFP49763 221 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 SNRNP35Q16560 246 aaKnown RBP12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 C10orf76Q5T2E6 689 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 CCNI2Q6ZMN8 369 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 STXBP4Q6ZWJ1 553 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 METTL3Q86U44 580 aaKnown RBP12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 CCDC65Q8IXS2 484 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 TRIML1Q8N9V2 468 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 OR2I1PQ8NGU4 316 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 FAM124BQ9H5Z6 455 aaPredicted RBP12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 CCSER2Q9H7U1 834 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 MARK1Q9P0L2 795 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 FBXO10Q9UK96 956 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 MYOFQ9NZM1 2061 aa12.2□□□□□ -0.46
IGHV3-60-201ENST00000521678 PCDH15Q96QU1 1955 aa12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 HELZP42694 1942 aaKnown RBP12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 ACACAQ13085 2346 aa12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 A8MXQ7 604 aa12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 PRRT4C9JH25 899 aa12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 GFRA2O00451 464 aa12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
IGHV3-60-201ENST00000521678 CACNG3O60359 315 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms