RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 STIM1Q13586 685 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 PTCHD3Q3KNS1 767 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 USP45Q70EL2 814 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 WBP1Q96G27 269 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 NLRP4Q96MN2 994 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 CCDC8Q9H0W5 538 aaPredicted RBP3.44□□□□□ -1.86
PCM1-214ENST00000521338 GBA2Q9HCG7 927 aaPredicted RBP3.44□□□□□ -1.86
PCM1-214ENST00000521338 DRG1Q9Y295 367 aaKnown RBP3.44□□□□□ -1.86
PCM1-214ENST00000521338 MED16Q9Y2X0 877 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 TMX2Q9Y320 296 aa3.44□□□□□ -1.86
PCM1-214ENST00000521338 ALG1L2C9J202 215 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 H3BUI4 141 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 IGKV3-20P01619 116 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 HOXB2P14652 356 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 CPA2P48052 419 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 CFHR3Q02985 330 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MTMR1Q13613 665 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 FAM50AQ14320 339 aaKnown RBP3.43□□□□□ -1.86
PCM1-214ENST00000521338 KCNB1Q14721 858 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MLC1Q15049 377 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MGAT5BQ3V5L5 792 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 CAPRIN2Q6IMN6 1127 aaKnown RBP3.43□□□□□ -1.86
PCM1-214ENST00000521338 MIER2Q8N344 545 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 STAG1Q8WVM7 1258 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MTMR8Q96EF0 704 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 SLC35A4Q96G79 324 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 SLC13A1Q9BZW2 595 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 ARHGAP39Q9C0H5 1083 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 MLXIPLQ9NP71 852 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 HOMER2Q9NSB8 354 aa3.43□□□□□ -1.86
PCM1-214ENST00000521338 DDX56Q9NY93 547 aaKnown RBP3.43□□□□□ -1.86
PCM1-214ENST00000521338 PSMD9O00233 223 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 CLIC1O00299 241 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 TLX3O43711 291 aaPredicted RBP3.42□□□□□ -1.86
PCM1-214ENST00000521338 PGGT1BP53609 377 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 BCAT1P54687 386 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 KRT17Q04695 432 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 ODF3L2Q3SX64 289 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 KHDC1LQ5JSQ8 128 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 FBXL22Q6P050 247 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 VSTM1Q6UX27 236 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 NPNTQ6UXI9 565 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 RBM23Q86U06 439 aaKnown RBP3.42□□□□□ -1.86
PCM1-214ENST00000521338 PNMA8AQ86V59 439 aaPredicted RBP3.42□□□□□ -1.86
PCM1-214ENST00000521338 RAB11FIP4Q86YS3 637 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 BPIFB1Q8TDL5 484 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 PPP2R3CQ969Q6 453 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 MSI2Q96DH6 328 aaKnown RBP3.42□□□□□ -1.86
PCM1-214ENST00000521338 WDYHV1Q96HA8 205 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 MRGPRX1Q96LB2 322 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 SLITRK1Q96PX8 696 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 PCDHA12Q9UN75 941 aa3.42□□□□□ -1.86
PCM1-214ENST00000521338 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.42□□□□□ -1.86
PCM1-214ENST00000521338 A0A087WWL8 130 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 C2CD4BA6NLJ0 364 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 SPTLC2O15270 562 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 CTIFO43310 598 aaKnown RBP3.41□□□□□ -1.86
PCM1-214ENST00000521338 KATNA1O75449 491 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 THP07101 528 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 POU2F2P09086 479 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 XRCC6P12956 609 aaKnown RBP eCLIP3.41□□□□□ -1.86
PCM1-214ENST00000521338 CREB1P16220 341 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 CCND1P24385 295 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 SATB1Q01826 763 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 PRTGQ2VWP7 1150 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 BRDTQ58F21 947 aaPredicted RBP3.41□□□□□ -1.86
PCM1-214ENST00000521338 CERCAMQ5T4B2 595 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 ZNF329Q86UD4 541 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 COL23A1Q86Y22 540 aaPredicted RBP3.41□□□□□ -1.86
PCM1-214ENST00000521338 TMEM255BQ8WV15 326 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 MIB2Q96AX9 1013 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 EDC3Q96F86 508 aaKnown RBP3.41□□□□□ -1.86
PCM1-214ENST00000521338 TM2D2Q9BX73 214 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 MYLK2Q9H1R3 596 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 SNX15Q9NRS6 342 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 MGAT4CQ9UBM8 478 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 MAFFQ9ULX9 164 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 TNKSO95271 1327 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 WASHC2CQ9Y4E1 1318 aa3.41□□□□□ -1.86
PCM1-214ENST00000521338 NDUFB8O95169 186 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 PLGP00747 810 aaPredicted RBP3.4□□□□□ -1.87
PCM1-214ENST00000521338 PDGFRBP09619 1106 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 FGF3P11487 239 aaPredicted RBP3.4□□□□□ -1.87
PCM1-214ENST00000521338 IL6STP40189 918 aaPredicted RBP3.4□□□□□ -1.87
PCM1-214ENST00000521338 PRKAG1P54619 331 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 CCNIQ14094 377 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 MFSD13AQ14CX5 517 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 PLEKHG6Q3KR16 790 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 PLA1AQ53H76 456 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 DCAF12L1Q5VU92 463 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 ZNF793Q6ZN11 406 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 RFX8Q6ZV50 586 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 DNAJC5GQ8N7S2 189 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 PLBD2Q8NHP8 589 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 NUDCD2Q8WVJ2 157 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 SCNM1Q9BWG6 230 aa3.4□□□□□ -1.87
PCM1-214ENST00000521338 TYW1Q9NV66 732 aaKnown RBP3.4□□□□□ -1.87
PCM1-214ENST00000521338 ERRFI1Q9UJM3 462 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms