RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
MRPS28-206ENST00000520946 KIF2CQ99661 725 aa12.21□□□□□ -0.45
MRPS28-206ENST00000520946 ZNF518BQ9C0D4 1074 aa12.21□□□□□ -0.45
MRPS28-206ENST00000520946 SPHK2Q9NRA0 654 aa12.21□□□□□ -0.45
MRPS28-206ENST00000520946 DNAJC17Q9NVM6 304 aaKnown RBP12.21□□□□□ -0.45
MRPS28-206ENST00000520946 LSM7Q9UK45 103 aaKnown RBP12.21□□□□□ -0.45
MRPS28-206ENST00000520946 APOBEC2Q9Y235 224 aaKnown RBP12.21□□□□□ -0.45
MRPS28-206ENST00000520946 CFAP47Q6ZTR5 3102 aa12.21□□□□□ -0.46
MRPS28-206ENST00000520946 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 PI4KAP42356 2102 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 CEP295Q9C0D2 2601 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 ANAPC1Q9H1A4 1944 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 NEDD8-MDP1E9PL57 170 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 CLDN5O00501 218 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 SH3BP5O60239 455 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 TACC1O75410 805 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 OLFM2O95897 454 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 MESP2Q0VG99 397 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 SCAPQ12770 1279 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 TPGS1Q6ZTW0 290 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 BBS7Q8IWZ6 715 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 TERB1Q8NA31 727 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 B3GALNT2Q8NCR0 500 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 SETD7Q8WTS6 366 aaKnown RBP12.2□□□□□ -0.46
MRPS28-206ENST00000520946 DNAJC19Q96DA6 116 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 TNIP3Q96KP6 325 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 BBS2Q9BXC9 721 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 MIR1-1HGQ9H1L0 117 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 CCDC86Q9H6F5 360 aaKnown RBP12.2□□□□□ -0.46
MRPS28-206ENST00000520946 CAPN10Q9HC96 672 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.2□□□□□ -0.46
MRPS28-206ENST00000520946 HSPBP1Q9NZL4 362 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 WDR35Q9P2L0 1181 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 SRPRBQ9Y5M8 271 aaKnown RBP12.2□□□□□ -0.46
MRPS28-206ENST00000520946 CLIC4Q9Y696 253 aa12.2□□□□□ -0.46
MRPS28-206ENST00000520946 BAHCC1Q9P281 2608 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 KIAA1549LQ6ZVL6 1849 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 IGHV1OR15-9A0A0B4J2B8 117 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 HOXC11O43248 304 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 PDCP20941 246 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 FAM193AP78312 1265 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 AMPD3Q01432 767 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 BIRC3Q13489 604 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 STARD3Q14849 445 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 SNRNP35Q16560 246 aaKnown RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 PEAR1Q5VY43 1037 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 PROSER1Q86XN7 944 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 TMEM25Q86YD3 366 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 PDILTQ8N807 584 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 SYAP1Q96A49 352 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 CAMK1GQ96NX5 476 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 CLIC6Q96NY7 704 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 B3GNT5Q9BYG0 378 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 DPEP3Q9H4B8 488 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
MRPS28-206ENST00000520946 DMAP1Q9NPF5 467 aaPredicted RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 DNAAF2Q9NVR5 837 aaKnown RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 HELZP42694 1942 aaKnown RBP12.19□□□□□ -0.46
MRPS28-206ENST00000520946 PTPRJQ12913 1337 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 SYNCRIPO60506 623 aaKnown RBP12.18□□□□□ -0.46
MRPS28-206ENST00000520946 CST3P01034 146 aaPredicted RBP12.18□□□□□ -0.46
MRPS28-206ENST00000520946 FTH1P19P0C7X4 201 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 CD59P13987 128 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 NDUFV2P19404 249 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 TUBP50607 506 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 CYP2J2P51589 502 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 SLC5A3P53794 718 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 EGFLAMQ63HQ2 1017 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 LIMS2Q7Z4I7 341 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
MRPS28-206ENST00000520946 NAXDQ8IW45 347 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 PNPLA1Q8N8W4 532 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 SCAMP5Q8TAC9 235 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 KCNK16Q96T55 309 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 FBXO44Q9H4M3 255 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 TLR8Q9NR97 1041 aaKnown RBP12.18□□□□□ -0.46
MRPS28-206ENST00000520946 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 GMIPQ9P107 970 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 FBXO2Q9UK22 296 aaPredicted RBP12.18□□□□□ -0.46
MRPS28-206ENST00000520946 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
MRPS28-206ENST00000520946 IGF2RP11717 2491 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 AP1G2O75843 785 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ACADMP11310 421 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 P4HA1P13674 534 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 TYRP14679 529 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 MAOBP27338 520 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 CD6P30203 668 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ATICP31939 592 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ATP5C1P36542 298 aaKnown RBP12.17□□□□□ -0.46
MRPS28-206ENST00000520946 DGKGP49619 791 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 CACNA2D1P54289 1103 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 MYL6P60660 151 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ASIC1P78348 528 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ARID5AQ03989 594 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 E2F5Q15329 346 aa12.17□□□□□ -0.46
MRPS28-206ENST00000520946 ZNF667Q5HYK9 610 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms