RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 LCP1P13796 627 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 MYOGP15173 224 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 RPL17P18621 184 aaKnown RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 COMTP21964 271 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 MCM3P25205 808 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 CTNNB1P35222 781 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 NDUFV1P49821 464 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 SLC5A3P53794 718 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 MRPS5P82675 430 aaKnown RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 SMAD3P84022 425 aaKnown RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 CREMQ03060 361 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 RAB33AQ14088 237 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 PIGHQ14442 188 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 TAF5Q15542 800 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 EFHC1Q5JVL4 640 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 TPGS2Q68CL5 300 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 SPRED2Q7Z698 418 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 EMC1Q8N766 993 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 MAFAQ8NHW3 353 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 ZNF461Q8TAF7 563 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 SPATA17Q96L03 361 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 CEP295NLQ96MC4 621 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 PGLYRP2Q96PD5 576 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 OSBPL9Q96SU4 736 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 NAP1L3Q99457 506 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 C17orf80Q9BSJ5 609 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 C11orf84Q9BUA3 381 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 ULBP1Q9BZM6 244 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 CNGB3Q9NQW8 809 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.94□□□□□ -0.98
VAPB-206ENST00000520497 ASNSD1Q9NWL6 643 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 IL37Q9NZH6 218 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 HSFX1Q9UBD0 423 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 AFF4Q9UHB7 1163 aaKnown RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 IP6K2Q9UHH9 426 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 PACSIN2Q9UNF0 486 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.94□□□□□ -0.98
VAPB-206ENST00000520497 PCDHA11Q9Y5I1 949 aa8.94□□□□□ -0.98
VAPB-206ENST00000520497 NUP210Q8TEM1 1887 aaPredicted RBP8.94□□□□□ -0.98
VAPB-206ENST00000520497 EYSQ5T1H1 3165 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 TMEM110-MUSTN1A8MSY1 372 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 DDX3YO15523 660 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 SART1O43290 800 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 SPOPO43791 374 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 HSF2BPO75031 334 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 DAB1O75553 588 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ZBED1O96006 694 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 RB1P06400 928 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 CA3P07451 260 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ATF2P15336 505 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 DNAJB1P25685 340 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 CTNNA2P26232 953 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 CTNNA1P35221 906 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 GRIK1P39086 918 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 CETN2P41208 172 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 PTPN9P43378 593 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 GPR15P49685 360 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 PEX5P50542 639 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ZNF143P52747 638 aaPredicted RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 ARPP19P56211 112 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 UBE3AQ05086 875 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ITIH3Q06033 890 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 DUSP4Q13115 394 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ACAP1Q15027 740 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 PTPROQ16827 1216 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 TEX35Q5T0J7 233 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 BNIPLQ7Z465 357 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SCN4BQ8IWT1 228 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SIX6OS1Q8N1H7 587 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 ARFGAP1Q8N6T3 406 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SCAMP5Q8TAC9 235 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 SPPL3Q8TCT6 385 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 AUTS2Q8WXX7 1259 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 IRGQQ8WZA9 623 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 NDRG1Q92597 394 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 ALG3Q92685 438 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 NT5C3BQ969T7 300 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SAMD11Q96NU1 681 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SLC2A13Q96QE2 648 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 CNPY3Q9BT09 278 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 DDX23Q9BUQ8 820 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 ALG13Q9NP73 1137 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 MRPL17Q9NRX2 175 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 MAFFQ9ULX9 164 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 SSX2IPQ9Y2D8 614 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 YBX2Q9Y2T7 364 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 DOCK8Q8NF50 2099 aa8.93□□□□□ -0.98
VAPB-206ENST00000520497 MYO18AQ92614 2054 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 PRRC2BQ5JSZ5 2229 aaKnown RBP8.93□□□□□ -0.98
VAPB-206ENST00000520497 GOLGA6L10A0A0M3HER8 536 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 CCDC66A2RUB6 948 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 YJEFN3A6XGL0 299 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 E7ENQ6 273 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 KCNK3O14649 394 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 FSCN2O14926 492 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 TEX28O15482 410 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 PSTPIP1O43586 416 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 LRCH4O75427 683 aa8.92□□□□□ -0.98
VAPB-206ENST00000520497 TADA3O75528 432 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms