RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 SMOQ99835 787 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 KCTD10Q9H3F6 313 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 COMMD8Q9NX08 183 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 HMGXB4Q9UGU5 601 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 HCN2Q9UL51 889 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 WASF3Q9UPY6 502 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 ATP8B3O60423 1300 aa12.5□□□□□ -0.41
POLB-208ENST00000520008 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 SLFN14P0C7P3 912 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 ZSCAN22P10073 491 aaPredicted RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 TIE1P35590 1138 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 TNFRSF4P43489 277 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 AFMP43652 599 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 ASPAP45381 313 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 GAD2Q05329 585 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 KDSRQ06136 332 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 BIRC3Q13489 604 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 EOGTQ5NDL2 527 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 C1orf220Q5T0J3 134 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 SCARA5Q6ZMJ2 495 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 CYP2U1Q7Z449 544 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 CRYBG2Q8N1P7 616 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 FRMD1Q8N878 549 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 WHAMMQ8TF30 809 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 CD248Q9HCU0 757 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 ZDHHC4Q9NPG8 344 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 SPHK2Q9NRA0 654 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 FAM13BQ9NYF5 915 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 GMIPQ9P107 970 aa12.49□□□□□ -0.41
POLB-208ENST00000520008 CHORDC1Q9UHD1 332 aaPredicted RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 EVLQ9UI08 416 aaPredicted RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 MBD1Q9UIS9 605 aaPredicted RBP12.49□□□□□ -0.41
POLB-208ENST00000520008 CHD6Q8TD26 2715 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 PDXKO00764 312 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 GIPC1O14908 333 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 KHNYNO15037 678 aaKnown RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 PHACTR2O75167 634 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 TULP3O75386 442 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 AP1G2O75843 785 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 ALDH1A2O94788 518 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 CCDC130P13994 396 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 PTGER3P43115 390 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 ME1P48163 572 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 NOVA1P51513 510 aaKnown RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 IRX4P78413 519 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 PKP1Q13835 747 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 SPDYCQ5MJ68 293 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 ATL3Q6DD88 541 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 ACOT1Q86TX2 421 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 UNC93AQ86WB7 457 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 SLC2A14Q8TDB8 520 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 RLN3Q8WXF3 142 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 TAF4BQ92750 862 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 POLMQ9NP87 494 aaPredicted RBP12.48□□□□□ -0.41
POLB-208ENST00000520008 TMEM9BQ9NQ34 198 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 CYLDQ9NQC7 956 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 TMEM74BQ9NUR3 256 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 SERTAD1Q9UHV2 236 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 STARD13Q9Y3M8 1113 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 PCDH15Q96QU1 1955 aa12.48□□□□□ -0.41
POLB-208ENST00000520008 TCRBV21S2A2A0A5A6 115 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 HHLA1C9JL84 531 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 IKBKBO14920 756 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 TRIM24O15164 1050 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 TLR5O60602 858 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 NR3C1P04150 777 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 RPN1P04843 607 aaKnown RBP12.47□□□□□ -0.41
POLB-208ENST00000520008 CSRP1P21291 193 aaKnown RBP12.47□□□□□ -0.41
POLB-208ENST00000520008 DHPSP49366 369 aaPredicted RBP12.47□□□□□ -0.41
POLB-208ENST00000520008 NDST1P52848 882 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 INCA1Q0VD86 236 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 ORC1Q13415 861 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 SGSM1Q2NKQ1 1148 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 KMT5BQ4FZB7 885 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 DAB2IPQ5VWQ8 1189 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 CLEC20AQ6ZU45 233 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 HTR3DQ70Z44 454 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 SV2AQ7L0J3 742 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 GPRIN1Q7Z2K8 1008 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 TMEM25Q86YD3 366 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 C12orf29Q8N999 325 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 TMC2Q8TDI7 906 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 SPACA7Q96KW9 195 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 TWNKQ96RR1 684 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 MED10Q9BTT4 135 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
POLB-208ENST00000520008 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
POLB-208ENST00000520008 OSER1Q9NX31 292 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
POLB-208ENST00000520008 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms