RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 GGA3Q9NZ52 723 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 PRR13Q9NZ81 148 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 GPRC5DQ9NZD1 345 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 GABBR1Q9UBS5 961 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 CGGBP1Q9UFW8 167 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-212ENST00000519622 CHORDC1Q9UHD1 332 aaPredicted RBP4.83□□□□□ -1.64
PABPC1-212ENST00000519622 SLC12A6Q9UHW9 1150 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 NEU2Q9Y3R4 380 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 PLXNB2O15031 1838 aa4.83□□□□□ -1.64
PABPC1-212ENST00000519622 GOLGB1Q14789 3259 aaKnown RBP4.83□□□□□ -1.64
PABPC1-212ENST00000519622 ZNF236Q9UL36 1845 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 DENND3A2RUS2 1198 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 O00370 1275 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 KIAA0391O15091 583 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TTI1O43156 1089 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CEP104O60308 925 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ZBED4O75132 1171 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PPM1BO75688 479 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 EIF3JO75822 258 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ARIH2O95376 493 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CYP1A1P04798 512 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 GSNP06396 782 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CD3EP07766 207 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 MYCLP12524 364 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 UNGP13051 313 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CYP11B1P15538 503 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ABCB4P21439 1286 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 UBA1P22314 1058 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 IVDP26440 423 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CNGA1P29973 690 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 GTF2H1P32780 548 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CTNNA1P35221 906 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 HSD17B3P37058 310 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 EPS15P42566 896 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TNNT3P45378 269 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PCBP3P57721 371 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 NLRP11P59045 1033 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 RNASE9P60153 205 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 MAP2K1Q02750 393 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 SERINC3Q13530 473 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TNFAIP1Q13829 316 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 BYSLQ13895 437 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CAPSQ13938 189 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 VGLL4Q14135 290 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PSMD6Q15008 389 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 SNRNP35Q16560 246 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ARHGAP44Q17R89 818 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CCDC142Q17RM4 750 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ZACNQ401N2 412 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 MAP9Q49MG5 647 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 XKR9Q5GH70 373 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TNFAIP8L3Q5GJ75 292 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TMEM63BQ5T3F8 832 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ALS2CLQ60I27 953 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CDCA2Q69YH5 1023 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 RHBDF2Q6PJF5 856 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 LRIG3Q6UXM1 1119 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 NSMFQ6X4W1 530 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 STXBP4Q6ZWJ1 553 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 MON1BQ7L1V2 547 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 APOBEC3FQ8IUX4 373 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 KLHL7Q8IXQ5 586 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TXLNBQ8N3L3 684 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CXorf38Q8TB03 319 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 MORC4Q8TE76 937 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 AFAP1L1Q8TED9 768 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TLCD1Q96CP7 247 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 LIN37Q96GY3 246 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ZBTB45Q96K62 511 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 RNPC3Q96LT9 517 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CCDC43Q96MW1 224 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ALPK1Q96QP1 1244 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 APBA2Q99767 749 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TEX13BQ9BXU2 312 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 POLR3FQ9H1D9 316 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PORCNQ9H237 461 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TAF1DQ9H5J8 278 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 UBE2TQ9NPD8 197 aaPredicted RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CYP26B1Q9NR63 512 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 C19orf73Q9NVV2 129 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 TMOD4Q9NZQ9 345 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 LMCD1Q9NZU5 365 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 LARSQ9P2J5 1176 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CNOT8Q9UFF9 292 aaKnown RBP4.82□□□□□ -1.64
PABPC1-212ENST00000519622 GTF3C4Q9UKN8 822 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 FRMD4BQ9Y2L6 1034 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PCDHA10Q9Y5I2 948 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 CD2APQ9Y5K6 639 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PPP2R3BQ9Y5P8 575 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 ALG6Q9Y672 507 aa4.82□□□□□ -1.64
PABPC1-212ENST00000519622 PDCD11Q14690 1871 aaKnown RBP4.81□□□□□ -1.64
PABPC1-212ENST00000519622 COL4A4P53420 1690 aaPredicted RBP4.81□□□□□ -1.64
PABPC1-212ENST00000519622 A0A0B4J269 797 aa4.81□□□□□ -1.64
PABPC1-212ENST00000519622 IGKV6-21A0A0C4DH24 114 aa4.81□□□□□ -1.64
PABPC1-212ENST00000519622 TMEM82A0PJX8 343 aa4.81□□□□□ -1.64
PABPC1-212ENST00000519622 GOLGA6BA6NDN3 693 aa4.81□□□□□ -1.64
PABPC1-212ENST00000519622 TMCO5BA8MYB1 307 aa4.81□□□□□ -1.64
PABPC1-212ENST00000519622 C19orf81C9J6K1 198 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms