RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 USP17L7P0C7H9 530 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 TMEM253P0C7T8 217 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 DESP17661 470 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 PTPN2P17706 415 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 ABCB4P21439 1286 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 GPC5P78333 572 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
SDC2-203ENST00000519587 SLC6A3Q01959 620 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 MTMR3Q13615 1198 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 COL19A1Q14993 1142 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 CTC1Q2NKJ3 1217 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 RARS2Q5T160 578 aaKnown RBP14.84□□□□□ -0.03
SDC2-203ENST00000519587 PM20D1Q6GTS8 502 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 CES5AQ6NT32 575 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 OLFML1Q6UWY5 402 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 FAM183BPQ6ZVS7 135 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 SLC26A9Q7LBE3 791 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 MON1AQ86VX9 555 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 XYLT1Q86Y38 959 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 SCUBE3Q8IX30 993 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 STKLD1Q8NE28 680 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 FAM149B1Q96BN6 582 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 CDK5RAP1Q96SZ6 601 aaKnown RBP14.84□□□□□ -0.03
SDC2-203ENST00000519587 PARVAQ9NVD7 372 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 TRPM5Q9NZQ8 1165 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 CNOT8Q9UFF9 292 aaKnown RBP14.84□□□□□ -0.03
SDC2-203ENST00000519587 PCDHA13Q9Y5I0 950 aa14.84□□□□□ -0.03
SDC2-203ENST00000519587 BRWD1Q9NSI6 2320 aa14.83□□□□□ -0.03
SDC2-203ENST00000519587 FAM170AA1A519 330 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 GOLGA8SH3BPF8 625 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 ZNF197O14709 1029 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 ZNF263O14978 683 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 LTFP02788 710 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 HMGA1P17096 107 aaKnown RBP14.83□□□□□ -0.04
SDC2-203ENST00000519587 RRM1P23921 792 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 VAV2P52735 878 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 GALCP54803 685 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 USP46P62068 366 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 TAF10Q12962 218 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 PTP4A2Q12974 167 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 SKIV2LQ15477 1246 aaKnown RBP14.83□□□□□ -0.04
SDC2-203ENST00000519587 TMC5Q6UXY8 1006 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 PDZD4Q76G19 769 aaPredicted RBP14.83□□□□□ -0.04
SDC2-203ENST00000519587 TADA2BQ86TJ2 420 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 RHOT2Q8IXI1 618 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 ACRBPQ8NEB7 543 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 ZNF707Q96C28 371 aaPredicted RBP14.83□□□□□ -0.04
SDC2-203ENST00000519587 RIPOR3Q96MK2 946 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 DESI2Q9BSY9 194 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 SELENOOQ9BVL4 669 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 TSGA10Q9BZW7 698 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 KCNF1Q9H3M0 494 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 GMIPQ9P107 970 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 TJP2Q9UDY2 1190 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 LCMT1Q9UIC8 334 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 ZMYM5Q9UJ78 669 aa14.83□□□□□ -0.04
SDC2-203ENST00000519587 TBX10O75333 385 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 DAB1O75553 588 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 GABBR2O75899 941 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 CYP1A2P05177 515 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 RHOP08100 348 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 RALAP11233 206 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 MYL4P12829 197 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 GABRR2P28476 465 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 TUBP50607 506 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 EPHA5P54756 1037 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 YWHAGP61981 247 aaKnown RBP eCLIP14.82□□□□□ -0.04
SDC2-203ENST00000519587 YWHAZP63104 245 aaKnown RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 ARHGAP15Q53QZ3 475 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 HS1BP3Q53T59 392 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 C2CD6Q53TS8 623 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 PLEKHA7Q6IQ23 1121 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 DCUN1D2Q6PH85 259 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 GPR149Q86SP6 731 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 C12orf76Q8N812 135 aaPredicted RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 RFFLQ8WZ73 363 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 MRPS31Q92665 395 aaKnown RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 MCRS1Q96EZ8 462 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 NECAB3Q96P71 396 aaPredicted RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 THAP2Q9H0W7 228 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 METTL5Q9NRN9 209 aaKnown RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 ABCC13Q9NSE7 274 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 OLA1Q9NTK5 396 aaKnown RBP14.82□□□□□ -0.04
SDC2-203ENST00000519587 CLIC5Q9NZA1 410 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 UVRAGQ9P2Y5 699 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 MYO1AQ9UBC5 1043 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 ADGRG1Q9Y653 693 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 CLUHO75153 1309 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 ANAPC1Q9H1A4 1944 aa14.82□□□□□ -0.04
SDC2-203ENST00000519587 YJEFN3A6XGL0 299 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 E7ENQ6 273 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 CAPN9O14815 690 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 CCP110O43303 1012 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 ATMINO43313 823 aaPredicted RBP14.81□□□□□ -0.04
SDC2-203ENST00000519587 KRT3P12035 628 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 DDX6P26196 483 aaKnown RBP eCLIP14.81□□□□□ -0.04
SDC2-203ENST00000519587 MTHFRP42898 656 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 KIF5AQ12840 1032 aa14.81□□□□□ -0.04
SDC2-203ENST00000519587 CCDC85BQ15834 202 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms