RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 SLC44A4Q53GD3 710 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 RAB41Q5JT25 222 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 SNX30Q5VWJ9 437 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 DENND1BQ6P3S1 775 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 BMP8AQ7Z5Y6 402 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 FBXL6Q8N531 539 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 TTC8Q8TAM2 541 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 SHDQ96IW2 340 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 RNF38Q9H0F5 515 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 GANQ9H2C0 597 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 TBC1D17Q9HA65 648 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 NMUR1Q9HB89 426 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 NLRC4Q9NPP4 1024 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 ST7Q9NRC1 585 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
TOP1MT-203ENST00000517857 F8VZ95 297 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 LEFTY2O00292 366 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 OLFM2O95897 454 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 ZBED1O96006 694 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 IRF1P10914 325 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 RARGP13631 454 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 PGFP49763 221 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 BPIFB4P59827 614 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 YWHAGP61981 247 aaKnown RBP eCLIP15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 PRKCQQ04759 706 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 C10orf120Q5SQS8 335 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 IER5LQ5T953 404 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 DPY19L2P1Q6NXN4 242 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 APTXQ7Z2E3 356 aaKnown RBP15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 DDX42Q86XP3 938 aaKnown RBP eCLIP15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 PASD1Q8IV76 773 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 RIN3Q8TB24 985 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 KCTD13Q8WZ19 329 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 SPAG5Q96R06 1193 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 PDCL3Q9H2J4 239 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 GKN1Q9NS71 199 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 CFAP97Q9P2B7 532 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 SIK3Q9Y2K2 1263 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 WNT6Q9Y6F9 365 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 PIAS3Q9Y6X2 628 aa15.31■□□□□ 0.04
TOP1MT-203ENST00000517857 SCAMP3O14828 347 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 MDM4O15151 490 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 KRT9P35527 623 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 ATP5C1P36542 298 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 TNK2Q07912 1038 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 GOLGA8FQ08AF8 430 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 GOLGA8DPQ0D2H9 430 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 MEA1Q16626 185 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 CWF19L1Q69YN2 538 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 PMF1Q6P1K2 205 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 SCD5Q86SK9 330 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 SLC47A2Q86VL8 602 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 FAM71AQ8IYT1 594 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 SLC35F5Q8WV83 523 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 NDRG1Q92597 394 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 CDK5RAP1Q96SZ6 601 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 NAA15Q9BXJ9 866 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 STK33Q9BYT3 514 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 TSPY26PQ9H489 355 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 EBF3Q9H4W6 596 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 CYLDQ9NQC7 956 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 CNGB3Q9NQW8 809 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 DUS2Q9NX74 493 aaKnown RBP15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 GTSE1Q9NYZ3 720 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 RASAL2Q9UJF2 1139 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 NUDT5Q9UKK9 219 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 SH3BP1Q9Y3L3 701 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 DAAM1Q9Y4D1 1078 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 CEP83Q9Y592 693 aa15.3■□□□□ 0.04
TOP1MT-203ENST00000517857 LRRC10BA6NIK2 292 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 ARNTLO00327 626 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 EPHB6O15197 1021 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 TBX18O95935 607 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 ARSAP15289 507 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 TCF3P15923 654 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 CLCN1P35523 988 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 GPD2P43304 727 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 SOX9P48436 509 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 UBXN2BQ14CS0 331 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 PDGFRLQ15198 375 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 ITPRIPL2Q3MIP1 535 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 TAF3Q5VWG9 929 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 SMYD5Q6GMV2 418 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 CACNA2D4Q7Z3S7 1137 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 OSCP1Q8WVF1 389 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 GOLGA1Q92805 767 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 HSFY1Q96LI6 401 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 FOXQ1Q9C009 403 aa15.29■□□□□ 0.04
TOP1MT-203ENST00000517857 MIS12Q9H081 205 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms