RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 C1orf228Q6PIY5 440 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 WDR59Q6PJI9 974 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 ALKAL1Q6UXT8 129 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 CTAGE6Q86UF2 777 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 RALGPS2Q86X27 583 aaPredicted RBP7.89□□□□□ -1.15
PVT1-206ENST00000517838 CTAGE4Q8IX94 777 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 LRRN4CLQ8ND94 238 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 SHKBP1Q8TBC3 707 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 BSNDQ8WZ55 320 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 TCEAL3Q969E4 200 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 MSANTD3Q96H12 275 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 ZFYVE19Q96K21 471 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 IFT74Q96LB3 600 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 ZNF512Q96ME7 567 aaPredicted RBP7.89□□□□□ -1.15
PVT1-206ENST00000517838 UROC1Q96N76 676 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 MKNK1Q9BUB5 465 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 LRRC3Q9BY71 257 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 GANQ9H2C0 597 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 AGPAT3Q9NRZ7 376 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 GTSE1Q9NYZ3 720 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 CDC23Q9UJX2 597 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 FBXL5Q9UKA1 691 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 MYO6Q9UM54 1294 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 REXO2Q9Y3B8 237 aaKnown RBP7.89□□□□□ -1.15
PVT1-206ENST00000517838 PCDHA13Q9Y5I0 950 aa7.89□□□□□ -1.15
PVT1-206ENST00000517838 NOTCH4Q99466 2003 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 IGF2RP11717 2491 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SSU72P8A0A1W2PR75 194 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SRRM3A6NNA2 597 aaPredicted RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 SYN3O14994 580 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SLC16A4O15374 487 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ST8SIA5O15466 376 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 RPP40O75818 363 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 MOCS3O95396 460 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 TRIM49P0CI25 452 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 TRIM49CP0CI26 452 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 MAPTP10636 758 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 HNRNPH3P31942 346 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 PEX3P56589 373 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 KCNA1Q09470 495 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 KCNMA1Q12791 1236 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 MAPK6Q16659 721 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 XKR4Q5GH76 650 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 STXBP5Q5T5C0 1151 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 CCDC70Q6NSX1 233 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 TMCO3Q6UWJ1 677 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ZNF720Q7Z2F6 126 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 TMC8Q8IU68 726 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ARID3BQ8IVW6 561 aaPredicted RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 ZBTB8OSQ8IWT0 167 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 YAF2Q8IY57 180 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SYNPOQ8N3V7 929 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SYN2Q92777 582 aaPredicted RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 KIFAP3Q92845 792 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 HPS1Q92902 700 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 E2F7Q96AV8 911 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ZC3H10Q96K80 434 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 CAPZA3Q96KX2 299 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ZMAT2Q96NC0 199 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 CDK15Q96Q40 435 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ADPGKQ9BRR6 497 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 GPR88Q9GZN0 384 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 INTS2Q9H0H0 1204 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 PCIF1Q9H4Z3 704 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 KMT5AQ9NQR1 393 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 ASAH2Q9NR71 780 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 SEPT11Q9NVA2 429 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 POLR3BQ9NW08 1133 aaPredicted RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 ARHGAP20Q9P2F6 1191 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 AFF4Q9UHB7 1163 aaKnown RBP7.88□□□□□ -1.15
PVT1-206ENST00000517838 TFR2Q9UP52 801 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 PCDHGA5Q9Y5G8 931 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 LAMA5O15230 3695 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 MIA3Q5JRA6 1907 aa7.88□□□□□ -1.15
PVT1-206ENST00000517838 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 C4orf47A7E2U8 309 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 H0YCG3 227 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 H7C4K7 107 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 PODXLO00592 558 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 MEFVO15553 781 aaPredicted RBP7.87□□□□□ -1.15
PVT1-206ENST00000517838 TGFB1I1O43294 461 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 VNN2O95498 520 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 CCDC172P0C7W6 258 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 FERP16591 822 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 SLC9A1P19634 815 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 HOXD13P35453 343 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 MPLP40238 635 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 STAT1P42224 750 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 MATR3P43243 847 aaKnown RBP eCLIP7.87□□□□□ -1.157e-9■■■□□ 18.1
PVT1-206ENST00000517838 APBA1Q02410 837 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 GFPT1Q06210 699 aaPredicted RBP7.87□□□□□ -1.15
PVT1-206ENST00000517838 RING1Q06587 406 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 TNK2Q07912 1038 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 MAPK7Q13164 816 aa7.87□□□□□ -1.15
PVT1-206ENST00000517838 PPP2R5AQ15172 486 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms