RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 DIO1P49895 249 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 GATMP50440 423 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PGDP52209 483 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ITGA8P53708 1063 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 STK3Q13188 491 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RAPGEF1Q13905 1077 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ARHGEF7Q14155 803 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SLC29A2Q14542 456 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KCNB1Q14721 858 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PFKFB3Q16875 520 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PPP4R4Q6NUP7 873 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 B3GNT9Q6UX72 402 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 IRF2BP2Q7Z5L9 587 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PIM3Q86V86 326 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ANKRD13BQ86YJ7 626 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZDHHC17Q8IUH5 632 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LIX1LQ8IVB5 337 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 YAF2Q8IY57 180 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 NRACQ8N912 160 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MAFAQ8NHW3 353 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZNF398Q8TD17 642 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 IPCEF1Q8WWN9 437 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MAP4K1Q92918 833 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZNF668Q96K58 619 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZBTB45Q96K62 511 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SIGLEC11Q96RL6 698 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CDH19Q9H159 772 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZIM2Q9NZV7 527 aa3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 DNMT3BQ9UBC3 853 aaKnown RBP3.45□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZMYM2Q9UBW7 1377 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 AQP7P3A6NL99 342 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 H7C4K7 107 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CLIC1O00299 241 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TBX3O15119 743 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 APEHP13798 732 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PRF1P14222 555 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HOXD9P28356 352 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TACR3P29371 465 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CACNB3P54284 484 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KRTAP10-9P60411 292 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RPS13P62277 151 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CFHR3Q02985 330 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MFSD13AQ14CX5 517 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CNN3Q15417 329 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MINDY4Q4G0A6 757 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 AWAT1Q58HT5 328 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TMTC4Q5T4D3 741 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 EPM2AIP1Q7L775 607 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 OVCH2Q7RTZ1 564 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SAMD14Q8IZD0 417 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 C12orf76Q8N812 135 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FAM71DQ8N9W8 422 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 OR56A3Q8NH54 315 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 PNISRQ8TF01 805 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CTHRC1Q96CG8 243 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 NMD3Q96D46 503 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZC3H10Q96K80 434 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RTFDC1Q9BY42 306 aaPredicted RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KRTAP1-5Q9BYS1 174 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FAM204AQ9H8W3 233 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ATP6V0A4Q9HBG4 840 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 USP29Q9HBJ7 922 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CPNE7Q9UBL6 633 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 AFF4Q9UHB7 1163 aaKnown RBP3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 STEAP1Q9UHE8 339 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 OGDHLQ9ULD0 1010 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HS3ST3B1Q9Y662 390 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 USP19O94966 1318 aa3.44□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TRIM43BA6NCK2 446 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FAM90A10PA6NDY2 464 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 H3BNX3 289 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RAB27BO00194 218 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 SPRY2O43597 315 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 RRP9O43818 475 aaKnown RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 USP12O75317 370 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 OAZ2O95190 189 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CD63P08962 238 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HGFP14210 728 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ME1P48163 572 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CPT1AP50416 773 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TXNL4AP83876 142 aaKnown RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HSF1Q00613 529 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TIAL1Q01085 375 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 STIM1Q13586 685 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CNGA2Q16280 664 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ST3GAL2Q16842 350 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 FAM110CQ1W6H9 321 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 ZNF750Q32MQ0 723 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CXorf57Q6NSI4 855 aaKnown RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 KCTD20Q7Z5Y7 419 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MICU3Q86XE3 530 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 CHPFQ8IZ52 775 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 MAML1Q92585 1016 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TRIM43Q96BQ3 446 aaPredicted RBP3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 HIST1H2AAQ96QV6 131 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 C22orf23Q9BZE7 217 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 LRRC27Q9C0I9 530 aa3.43□□□□□ -1.86
RNU6-1088P-201ENST00000516850 TMEM60Q9H2L4 133 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms