RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 A0A1W2PQH9 124 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 LEFTY2O00292 366 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MAN2B1O00754 1011 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 CYP26A1O43174 497 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 TLR5O60602 858 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 TBX18O95935 607 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MBL2P11226 248 aaPredicted RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 ATP1A3P13637 1013 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 CD72P21854 359 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MYH10P35580 1976 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 USP8P40818 1118 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 RPL34P49207 117 aaKnown RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 BPIFB4P59827 614 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 PTK2Q05397 1052 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 TNK2Q07912 1038 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 RUNX3Q13761 415 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MTF1Q14872 753 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MEA1Q16626 185 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 CWF19L1Q69YN2 538 aaKnown RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 ARHGAP18Q8N392 663 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 STK32AQ8WU08 396 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 OSCP1Q8WVF1 389 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 SECISBP2LQ93073 1101 aaKnown RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 STK33Q9BYT3 514 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 OSBPL6Q9BZF3 934 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 C8orf33Q9H7E9 229 aaPredicted RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 LRRC4Q9HBW1 653 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 MTF2Q9Y483 593 aaPredicted RBP11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 CPQQ9Y646 472 aa11.73□□□□□ -0.53
SCARNA20-201ENST00000516768 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 OTOL1A6NHN0 477 aaPredicted RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 FAM170BA6NMN3 283 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 LGALS16A8MUM7 142 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 THAP12O43422 761 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 CAVIN2O95810 425 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 RALAP11233 206 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 RARGP13631 454 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 COL9A1P20849 921 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 RFX1P22670 979 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 GNA15P30679 374 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 KPNA1P52294 538 aaPredicted RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 NUBP1P53384 320 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 VCPP55072 806 aaKnown RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 UBXN1Q04323 297 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 USP4Q13107 963 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 FZD5Q13467 585 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 PDGFRLQ15198 375 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 ITPRIPL2Q3MIP1 535 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 TRIM68Q6AZZ1 485 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 TPRG1Q6ZUI0 275 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 BHLHA9Q7RTU4 235 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 RALGPS2Q86X27 583 aaPredicted RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 DDX42Q86XP3 938 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 ZNF687Q8N1G0 1237 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 WDTC1Q8N5D0 677 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 TMEM105Q8N8V8 129 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 FAM3CQ92520 227 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 ERGIC2Q96RQ1 377 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 LSM14BQ9BX40 385 aaKnown RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 KLF16Q9BXK1 252 aaPredicted RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 ULBP1Q9BZM6 244 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 LHX5Q9H2C1 402 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 EBF3Q9H4W6 596 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 CNGB3Q9NQW8 809 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 DUS2Q9NX74 493 aaKnown RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 SMPD4Q9NXE4 827 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 DNMT3LQ9UJW3 386 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 NAGPAQ9UK23 515 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 PCDHGC3Q9UN70 934 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 SIK3Q9Y2K2 1263 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 MRPS17Q9Y2R5 130 aaKnown RBP11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 FHOD1Q9Y613 1164 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 F5P12259 2224 aa11.72□□□□□ -0.53
SCARNA20-201ENST00000516768 M0QYV0 167 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 SLC9A3R1O14745 358 aaPredicted RBP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 ARSAP15289 507 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 ACADSBP45954 432 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 RGS7P49802 495 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 KLK7P49862 253 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 YWHAGP61981 247 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 RAPGEF1Q13905 1077 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 SYCP1Q15431 976 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 EML3Q32P44 896 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 C10orf120Q5SQS8 335 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 BSPRYQ5W0U4 402 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 DENND1BQ6P3S1 775 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 C1orf228Q6PIY5 440 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 HTR3DQ70Z44 454 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 TADA2BQ86TJ2 420 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 TMEM110Q86TL2 294 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 SLC47A2Q86VL8 602 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
SCARNA20-201ENST00000516768 TTC16Q8NEE8 873 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms