RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 IPO4Q8TEX9 1081 aaKnown RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 GATAD1Q8WUU5 269 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 EAF2Q96CJ1 260 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CEP95Q96GE4 821 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 GPATCH3Q96I76 525 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 MRGPRX1Q96LB2 322 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 NEUROD6Q96NK8 337 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 WWC2-AS2Q96NR7 200 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TRAIPQ9BWF2 469 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 KRTAP4-5Q9BYR2 181 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 MAF1Q9H063 256 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 RASSF4Q9H2L5 321 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 C1orf115Q9H7X2 142 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 PDE7BQ9NP56 450 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 MTMR4Q9NYA4 1195 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 KANSL3Q9P2N6 904 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNHIT2Q9UHR6 403 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ING1Q9UK53 422 aaPredicted RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 ADAM28Q9UKQ2 775 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 G3BP2Q9UN86 482 aaKnown RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 COPG1Q9Y678 874 aaKnown RBP3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 CDY1Q9Y6F8 540 aa3.51□□□□□ -1.85
SCARNA13-201ENST00000516672 TTC41PQ6P2S7 1318 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 LCE6AA0A183 80 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 RNF103O00237 685 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF213O14771 459 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SYN3O14994 580 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 TMPRSS2O15393 492 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 DPM1O60762 260 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ZNF623O75123 536 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 NR1I2O75469 434 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 TMEM63AO94886 807 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SEC24AO95486 1093 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 TCN2P20062 427 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SOX18P35713 384 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SLC16A2P36021 539 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 PBX1P40424 430 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ETV5P41161 510 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 MAPK10P53779 464 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 DSC1Q08554 894 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ASIC2Q16515 512 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 Q5PR19 223 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 FAM171A1Q5VUB5 890 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 CES4AQ5XG92 561 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 DSG4Q86SJ6 1040 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ETFBKMTQ8IXQ9 262 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SLFN12Q8IYM2 578 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 OR4C6Q8NH72 309 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 RIN3Q8TB24 985 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 RABGGTAQ92696 567 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 DDRGK1Q96HY6 314 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 APOLD1Q96LR9 279 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 BARD1Q99728 777 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 LRRC3Q9BY71 257 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 POLDIP3Q9BY77 421 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 NIFKQ9BYG3 293 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 CDH19Q9H159 772 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ATXN3LQ9H3M9 355 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 OSBPL3Q9H4L5 887 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 C6orf106Q9H6K1 298 aaPredicted RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 CYP4F11Q9HBI6 524 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 CD248Q9HCU0 757 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 RRAGDQ9NQL2 400 aaPredicted RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 GDF3Q9NR23 364 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 USP36Q9P275 1121 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 MAGEC2Q9UBF1 373 aaPredicted RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 DBNLQ9UJU6 430 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 CCL26Q9Y258 94 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 EXOC6BQ9Y2D4 811 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 NTNG1Q9Y2I2 539 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 PCDHA1Q9Y5I3 950 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 WASF2Q9Y6W5 498 aa3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 BAZ2AQ9UIF9 1905 aaKnown RBP3.5□□□□□ -1.85
SCARNA13-201ENST00000516672 SF3B1O75533 1304 aaKnown RBP eCLIP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 LY6G6EA0A0G2JKS1 128 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 MAGEB6P1A0A0J9YX57 407 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 GSTTP1A0A1W2PQM5 241 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 E2F3O00716 465 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 FFAR2O15552 330 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ARHGEF9O43307 516 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 TADA2AO75478 443 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 IDH1O75874 414 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 KAT7O95251 611 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ATE1O95260 518 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 MATN4O95460 622 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 VTNP04004 478 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 RAF1P04049 648 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 ZFYP08048 801 aaPredicted RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 GLI1P08151 1106 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 PARP1P09874 1014 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 HSPD1P10809 573 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 BMP7P18075 431 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 EIF4BP23588 611 aaKnown RBP3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 KLRC1P26715 233 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 WEE1P30291 646 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 OXTRP30559 389 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 THBS2P35442 1172 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 RXRGP48443 463 aa3.49□□□□□ -1.85
SCARNA13-201ENST00000516672 VAMP7P51809 220 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms