RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 K7ENM7 598 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 ACTL6BO94805 426 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 DDNO94850 711 aaPredicted RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 GLP2RO95838 553 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 CHEK2O96017 543 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 AMHP03971 560 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 PIM1P11309 404 aaPredicted RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 XRCC6P12956 609 aaKnown RBP eCLIP6.4□□□□□ -1.38
CAST-243ENST00000515160 ATP1A3P13637 1013 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 TPH1P17752 444 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 IGFBP6P24592 240 aaPredicted RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 TUBP50607 506 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 ADCY7P51828 1080 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 ARHGEF7Q14155 803 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 RRS1Q15050 365 aaKnown RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 TRIM71Q2Q1W2 868 aaKnown RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 CRB2Q5IJ48 1285 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 TMTC4Q5T4D3 741 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 UTP14CQ5TAP6 766 aaKnown RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 AGBL4Q5VU57 503 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 ANKRD53Q8N9V6 530 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 MZB1Q8WU39 189 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 ERP27Q96DN0 273 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 SPATA5L1Q9BVQ7 753 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 CPEB1Q9BZB8 566 aaKnown RBP6.4□□□□□ -1.38
CAST-243ENST00000515160 MCOLN1Q9GZU1 580 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 CAPN11Q9UMQ6 739 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 SCN4AP35499 1836 aa6.4□□□□□ -1.38
CAST-243ENST00000515160 WDR33Q9C0J8 1336 aaKnown RBP6.4□□□□□ -1.39
CAST-243ENST00000515160 USP42Q9H9J4 1324 aaKnown RBP6.4□□□□□ -1.39
CAST-243ENST00000515160 CARMIL3Q8ND23 1372 aa6.4□□□□□ -1.39
CAST-243ENST00000515160 MKI67P46013 3256 aaKnown RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 A6NCN8 305 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 PJA2O43164 708 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 USP1O94782 785 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 DDX58O95786 925 aaKnown RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 CYP2C9P11712 490 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 ZNF28P17035 718 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 AARSP49588 968 aaKnown RBP eCLIP6.39□□□□□ -1.39
CAST-243ENST00000515160 CPT1AP50416 773 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 WNT3P56703 355 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 AP2B1P63010 937 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 MAPK7Q13164 816 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 DUSP8Q13202 625 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 PRKG2Q13237 762 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 CUL4BQ13620 913 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 ACAP1Q15027 740 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 KCNMB1Q16558 191 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 INSCQ1MX18 579 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 SLC5A9Q2M3M2 681 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 FAM160B1Q5W0V3 765 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 RAP1GAP2Q684P5 730 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 PLAG1Q6DJT9 500 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 Q6ZUG5 572 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 USP30Q70CQ3 517 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 SLC44A2Q8IWA5 706 aaPredicted RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 FAM9BQ8IZU0 186 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 FAM46DQ8NEK8 389 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 SLC35B2Q8TB61 432 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 HTRA1Q92743 480 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 RPL10LQ96L21 214 aaKnown RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 KCNC2Q96PR1 638 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 RTKNQ9BST9 563 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 DDX23Q9BUQ8 820 aaKnown RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 PABPC3Q9H361 631 aaKnown RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 GSTO2Q9H4Y5 243 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 TAF1DQ9H5J8 278 aaPredicted RBP6.39□□□□□ -1.39
CAST-243ENST00000515160 XPNPEP3Q9NQH7 507 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 CA14Q9ULX7 337 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 AGAP1Q9UPQ3 857 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 INSRP06213 1382 aa6.39□□□□□ -1.39
CAST-243ENST00000515160 SZT2Q5T011 3432 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 CCP110O43303 1012 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 PEX10O60683 326 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 TBX18O95935 607 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 POMCP01189 267 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 CKBP12277 381 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 ATICP31939 592 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 AMPHP49418 695 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 PNLIPRP1P54315 467 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 ALDH18A1P54886 795 aaKnown RBP6.38□□□□□ -1.39
CAST-243ENST00000515160 NPEPPSP55786 919 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 CLRN1P58418 232 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 RAP2BP61225 183 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 VAMP2P63027 116 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 SETQ01105 290 aaPredicted RBP6.38□□□□□ -1.39
CAST-243ENST00000515160 MAP2K1Q02750 393 aaPredicted RBP6.38□□□□□ -1.39
CAST-243ENST00000515160 UBE3AQ05086 875 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 NSUN2Q08J23 767 aaKnown RBP eCLIP6.38□□□□□ -1.39
CAST-243ENST00000515160 SLC12A1Q13621 1099 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 USP10Q14694 798 aaKnown RBP6.38□□□□□ -1.39
CAST-243ENST00000515160 DEFB115Q30KQ5 88 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 ZMAT1Q5H9K5 638 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 PRR31Q5SQ13 230 aa6.38□□□□□ -1.39
CAST-243ENST00000515160 ATPAF1Q5TC12 328 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms