RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 GJA10Q969M2 543 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 LENG8Q96PV6 779 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PACSIN1Q9BY11 444 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SIAEQ9HAT2 523 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 TIMMDC1Q9NPL8 285 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SELENONQ9NZV5 590 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SAMD15Q9P1V8 674 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 VPS28Q9UK41 221 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 HPS5Q9UPZ3 1129 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 RGPD5Q99666 1765 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 A0A1B0GVC2 190 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CTAGE15A4D2H0 777 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 EFCAB8A8MWE9 144 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 NUDT19A8MXV4 375 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 FPGTO14772 594 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 BACH1O14867 736 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 FRS3O43559 492 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CTAGE8P0CG41 777 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 MYBP10242 640 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PRKAR1AP10644 381 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ATP5F1P24539 256 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 NFKB2Q00653 900 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PKP1Q13835 747 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CRTC2Q53ET0 693 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DAB2IPQ5VWQ8 1189 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SPOPLQ6IQ16 392 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CYP4F22Q6NT55 531 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CTAGE6Q86UF2 777 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 RALGPS2Q86X27 583 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 VSTM4Q8IW00 320 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CTAGE4Q8IX94 777 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ARHGAP24Q8N264 748 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CPSF7Q8N684 471 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SNX31Q8N9S9 440 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GLIS1Q8NBF1 620 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SPPL3Q8TCT6 385 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 KCTD4Q8WVF5 259 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SLC10A4Q96EP9 437 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DACH2Q96NX9 599 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 RIMS4Q9H426 269 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 RRP7AQ9Y3A4 280 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 C4BP0C0L5 1744 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 KIF20BQ96Q89 1820 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 MEX3AA1L020 520 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 BECN2A8MW95 431 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 H0YJX3 145 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CIAO1O76071 339 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CTSHP09668 335 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PCSK2P16519 638 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ITGA2P17301 1181 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 CNTFP26441 200 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 EIF2B2P49770 351 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ELF3P78545 371 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 LGALS3BPQ08380 585 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SSRP1Q08945 709 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 SLC14A1Q13336 389 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DRP2Q13474 957 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GALNT3Q14435 633 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 HABP2Q14520 560 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GRIK4Q16099 956 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 PLA2G4FQ68DD2 849 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ELMOD2Q8IZ81 293 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GPR161Q8N6U8 529 aaKnown RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 STKLD1Q8NE28 680 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ANGPTL6Q8NI99 470 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DPF2Q92785 391 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 MARC2Q969Z3 335 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GRIP2Q9C0E4 1043 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 ACTR5Q9H9F9 607 aaPredicted RBP7.51□□□□□ -1.21
NIPBL-208ENST00000514335 TXNDC16Q9P2K2 825 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 KLHL3Q9UH77 587 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 DTX4Q9Y2E6 619 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 COMMD3-BMI1R4GMX3 469 aa7.51□□□□□ -1.21
NIPBL-208ENST00000514335 GRIN2DO15399 1336 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 C4AP0C0L4 1744 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 MOXD2PA6NHM9 499 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 FADS2P1A8MWK0 482 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 H7C1D1 291 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 GPR171O14626 319 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 PPEF2O14830 753 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 EIF3HO15372 352 aaKnown RBP eCLIP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CDC123O75794 336 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 TOMM70O94826 608 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 HMGN1P05114 100 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 PF4V1P10720 104 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 EEF1GP26641 437 aaKnown RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CYP4F2P78329 520 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 CYP4F3Q08477 520 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 XRCC4Q13426 336 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 TXNRD1Q16881 649 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ZNF827Q17R98 1081 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 C12orf60Q5U649 245 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 KIAA0319Q5VV43 1072 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 JMJD6Q6NYC1 403 aaPredicted RBP7.5□□□□□ -1.21
NIPBL-208ENST00000514335 NSMFQ6X4W1 530 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 TBC1D19Q8N5T2 526 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 DNAAF3Q8N9W5 541 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 ANKRD52Q8NB46 1076 aa7.5□□□□□ -1.21
NIPBL-208ENST00000514335 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms