RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 SNX25Q9H3E2 840 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 CYP3A43Q9HB55 503 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 MRPL17Q9NRX2 175 aaKnown RBP10.05□□□□□ -0.8
SNF8-211ENST00000512243 PCMTD2Q9NV79 361 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 L1RE1Q9UN81 338 aa10.05□□□□□ -0.8
SNF8-211ENST00000512243 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 TEX33O43247 280 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 LRRN2O75325 713 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 TACC1O75410 805 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 EFEMP2O95967 443 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 SLC9A1P19634 815 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 WARSP23381 471 aaKnown RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 ASPAP45381 313 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 RAP1GAPP47736 663 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 LHX1P48742 406 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 CUL2Q13617 745 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 PTPN14Q15678 1187 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 RTP2Q5QGT7 225 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 RNF43Q68DV7 783 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 SARM1Q6SZW1 724 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 DPH6Q7L8W6 267 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 TAS1R1Q7RTX1 841 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 ARHGEF19Q8IW93 802 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 GPR65Q8IYL9 337 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 THEM5Q8N1Q8 247 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 LMO3Q8TAP4 145 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 CCDC74AQ96AQ1 378 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 B3GALT6Q96L58 329 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 NAP1L5Q96NT1 182 aaPredicted RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 ERGIC2Q96RQ1 377 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 FAM83CQ9BQN1 747 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 BCO2Q9BYV7 579 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 XPO4Q9C0E2 1151 aaKnown RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 DNAI2Q9GZS0 605 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 TTYH1Q9H313 450 aaPredicted RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNF8-211ENST00000512243 CHST7Q9NS84 486 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 SIK3Q9Y2K2 1263 aa10.04□□□□□ -0.8
SNF8-211ENST00000512243 TIMM13Q9Y5L4 95 aaPredicted RBP10.04□□□□□ -0.8
SNF8-211ENST00000512243 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 OR6C75A6NL08 312 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 RFXAPO00287 272 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 CXCL14O95715 111 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 CTSBP07858 339 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 FAM163BP0C2L3 166 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 CD58P19256 250 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 TRIM21P19474 475 aaKnown RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 DNAJB1P25685 340 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 MAOBP27338 520 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 PCSK1P29120 753 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 MFAP3P55082 362 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 TSPY1Q01534 308 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 GCNT1Q02742 428 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 SOWAHAQ2M3V2 549 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 PRSS55Q6UWB4 352 aaPredicted RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 RRAGAQ7L523 313 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 LIMS2Q7Z4I7 341 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 OSTM1Q86WC4 334 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 ZDHHC13Q8IUH4 622 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 TTC39CQ8N584 583 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 NEK11Q8NG66 645 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 OR6B3Q8NGW1 331 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 MICAL1Q8TDZ2 1067 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 KBTBD7Q8WVZ9 684 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 AUTS2Q8WXX7 1259 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 PPP2R3CQ969Q6 453 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 MRPL38Q96DV4 380 aaKnown RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 MRPL45Q9BRJ2 306 aaKnown RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 EMILIN2Q9BXX0 1053 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 TRIM5Q9C035 493 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 SDCBP2Q9H190 292 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 PRDM12Q9H4Q4 367 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 FAM124BQ9H5Z6 455 aaPredicted RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 SIX2Q9NPC8 291 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 UBE2TQ9NPD8 197 aaPredicted RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 PLCB1Q9NQ66 1216 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 FAM207AQ9NSI2 230 aaPredicted RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 BRWD1Q9NSI6 2320 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 DDX43Q9NXZ2 648 aaKnown RBP10.03□□□□□ -0.8
SNF8-211ENST00000512243 MTRRQ9UBK8 725 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 HIF3AQ9Y2N7 669 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 DAAM1Q9Y4D1 1078 aa10.03□□□□□ -0.8
SNF8-211ENST00000512243 GOLGA6L3A6NEY3 463 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 A8MXQ7 604 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 OAZ2O95190 189 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 TIAF1O95411 115 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 WEE2P0C1S8 567 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 MAP4P27816 1152 aaKnown RBP10.02□□□□□ -0.81
SNF8-211ENST00000512243 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.81
SNF8-211ENST00000512243 KLK7P49862 253 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 CDH8P55286 799 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 ERVFC1P60507 584 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 INCA1Q0VD86 236 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 RAPGEF1Q13905 1077 aa10.02□□□□□ -0.81
SNF8-211ENST00000512243 MRPL58Q14197 206 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms