RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, human

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP2-215	ENST00000512098	SFTPC	P11686	197 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	ZNF132	P52740	706 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	SKOR1	P84550	965 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	ARL13B	Q3SXY8	428 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	C9orf57	Q5W0N0	161 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	TRIM22	Q8IYM9	498 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	KRI1	Q8N9T8	703 aa	Known RBP	13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	ERLEC1	Q96DZ1	483 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	DUSP9	Q99956	384 aa	Known RBP	13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	CCSER1	Q9C0I3	900 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	MKRN2	Q9H000	416 aa	Known RBP	13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	RNF38	Q9H0F5	515 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	ASCL3	Q9NQ33	180 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	CPQ	Q9Y646	472 aa		13.58	□□□□□ -0.24
SSBP2-215	ENST00000512098	CYB561D2	O14569	222 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	TRAK2	O60296	914 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	DEXI	O95424	95 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	ADRB2	P07550	413 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	HMGB1	P09429	215 aa	Known RBP	13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	POU3F2	P20265	443 aa	Predicted RBP	13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	CYP2F1	P24903	491 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	NPTX2	P47972	431 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	LSS	P48449	732 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	TSPY1	Q01534	308 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	PPP2R3A	Q06190	1150 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	MCL1	Q07820	350 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	ADCK5	Q3MIX3	580 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	FUT11	Q495W5	492 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	KCNT1	Q5JUK3	1230 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	IGF2-AS	Q6U949	168 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	CCDC81	Q6ZN84	652 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	GATAD2A	Q86YP4	633 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	FBXL16	Q8N461	479 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	SAP25	Q8TEE9	199 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	MMS19	Q96T76	1030 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	POLD4	Q9HCU8	107 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	THSD1	Q9NS62	852 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	RBM19	Q9Y4C8	960 aa	Known RBP	13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	PCDHB1	Q9Y5F3	818 aa		13.57	□□□□□ -0.24
SSBP2-215	ENST00000512098	BLACE	A4D250	179 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	CCDC169	A6NNP5	214 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	LACTBL1	A8MY62	500 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	TRIM24	O15164	1050 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	MED24	O75448	989 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	MT-CO3	P00414	261 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	MPO	P05164	745 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	GRIK1	P39086	918 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	INHBC	P55103	352 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	GABRE	P78334	506 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	ASIC1	P78348	528 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	E2F1	Q01094	437 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	STARD3	Q14849	445 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	CALCRL	Q16602	461 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	CFAP221	Q4G0U5	840 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	WSCD1	Q658N2	575 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	GRAMD4	Q6IC98	578 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	KDM7A	Q6ZMT4	941 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	BRF1	Q92994	677 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	CCDC97	Q96F63	343 aa	Predicted RBP	13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	VCPIP1	Q96JH7	1222 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	ELF4	Q99607	663 aa	Predicted RBP	13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	TRPM5	Q9NZQ8	1165 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	CFAP97	Q9P2B7	532 aa		13.56	□□□□□ -0.24
SSBP2-215	ENST00000512098	PRRT4	C9JH25	899 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SCAMP3	O14828	347 aa	Known RBP	13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	YKT6	O15498	198 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	CLDN3	O15551	220 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	IGHD	P01880	384 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	ITGAV	P06756	1048 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	CKMT2	P17540	419 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	ACP1	P24666	158 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	PPP3CC	P48454	512 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	PEX3	P56589	373 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	GRIN1	Q05586	938 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SSRP1	Q08945	709 aa	Known RBP	13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	AAMP	Q13685	434 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	LAYN	Q6UX15	382 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098		Q6ZUG5	572 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	PIK3AP1	Q6ZUJ8	805 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	TMPRSS6	Q8IU80	811 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	EID2	Q8N6I1	236 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SCFD1	Q8WVM8	642 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SNX19	Q92543	992 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SIPA1	Q96FS4	1042 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	CEP295NL	Q96MC4	621 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	POLR1B	Q9H9Y6	1135 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	LRRC4C	Q9HCJ2	640 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	SPHK2	Q9NRA0	654 aa		13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.55	□□□□□ -0.24
SSBP2-215	ENST00000512098	ZNF840P	A6NDX5	716 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	WASH3P	C4AMC7	463 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	OAS1	P00973	400 aa	Known RBP	13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	ITGB2	P05107	769 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	ABCB4	P21439	1286 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	TXK	P42681	527 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	FOXK1	P85037	733 aa		13.54	□□□□□ -0.24
SSBP2-215	ENST00000512098	KRT32	Q14532	448 aa		13.54	□□□□□ -0.24

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