RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ANTXRLA6NF34 631 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 CYP17A1P05093 508 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 TBXAS1P24557 533 aaPredicted RBP17.38■□□□□ 0.37
DDX41-213ENST00000512027 GALK1P51570 392 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 YWHAEP62258 255 aaKnown RBP17.38■□□□□ 0.37
DDX41-213ENST00000512027 APBA1Q02410 837 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 PDE4CQ08493 712 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 GAB4Q2WGN9 574 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 SGO2Q562F6 1265 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 HSP90AA4PQ58FG1 418 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 TMEM196Q5HYL7 178 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 C1orf228Q6PIY5 440 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 PIGZQ86VD9 579 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 UBA3Q8TBC4 463 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 TFAP2BQ92481 460 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
DDX41-213ENST00000512027 EZH1Q92800 747 aaPredicted RBP17.38■□□□□ 0.37
DDX41-213ENST00000512027 KREMEN1Q96MU8 473 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 ZSWIM1Q9BR11 485 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 CRACR2AQ9BSW2 395 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 DNAI2Q9GZS0 605 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 NACA2Q9H009 215 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 PNPLA8Q9NP80 782 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 POLR3BQ9NW08 1133 aaPredicted RBP17.38■□□□□ 0.37
DDX41-213ENST00000512027 FBXO4Q9UKT5 387 aa17.38■□□□□ 0.37
DDX41-213ENST00000512027 TRDMT1O14717 391 aaKnown RBP17.37■□□□□ 0.37
DDX41-213ENST00000512027 P4HA2O15460 535 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 NFATC1O95644 943 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 TDGF1P13385 188 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 RARGP13631 454 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
DDX41-213ENST00000512027 TUBP50607 506 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 CETN1Q12798 172 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 DGKKQ5KSL6 1271 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 GJB7Q6PEY0 223 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 ANKRD52Q8NB46 1076 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 RBBP8NLQ8NC74 664 aaPredicted RBP17.37■□□□□ 0.37
DDX41-213ENST00000512027 NKD2Q969F2 451 aaPredicted RBP17.37■□□□□ 0.37
DDX41-213ENST00000512027 IPO9Q96P70 1041 aaKnown RBP17.37■□□□□ 0.37
DDX41-213ENST00000512027 P2RY13Q9BPV8 354 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 NAGPAQ9UK23 515 aa17.37■□□□□ 0.37
DDX41-213ENST00000512027 ZNF292O60281 2723 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 O00370 1275 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 FGFR1OPO95684 399 aaKnown RBP17.36■□□□□ 0.37
DDX41-213ENST00000512027 VDRP11473 427 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 OPRD1P41143 372 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 BCAT1P54687 386 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 DMWDQ09019 674 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 MESP2Q0VG99 397 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 GRSF1Q12849 480 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDX41-213ENST00000512027 DHCR24Q15392 516 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 CCDC186Q7Z3E2 898 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 C12orf40Q86WS4 652 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 DDX42Q86XP3 938 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDX41-213ENST00000512027 BBS7Q8IWZ6 715 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 CD101Q93033 1021 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 FAM124BQ9H5Z6 455 aaPredicted RBP17.36■□□□□ 0.37
DDX41-213ENST00000512027 CYLDQ9NQC7 956 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.36■□□□□ 0.37
DDX41-213ENST00000512027 SH3BP1Q9Y3L3 701 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 USP3Q9Y6I4 520 aa17.36■□□□□ 0.37
DDX41-213ENST00000512027 RIF1Q5UIP0 2472 aaKnown RBP17.36■□□□□ 0.37
DDX41-213ENST00000512027 PIK3R2O00459 728 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 RNF40O75150 1001 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 SLC9A1P19634 815 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 MTIF2P46199 727 aaKnown RBP17.35■□□□□ 0.37
DDX41-213ENST00000512027 CXCL12P48061 93 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 CCR3P51677 355 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 TKTL1P51854 596 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 BST2Q10589 180 aaKnown RBP17.35■□□□□ 0.37
DDX41-213ENST00000512027 TPD52L1Q16890 204 aaPredicted RBP17.35■□□□□ 0.37
DDX41-213ENST00000512027 ZNF528Q3MIS6 628 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 RAB41Q5JT25 222 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 C10orf120Q5SQS8 335 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 RHBDF2Q6PJF5 856 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 SFTPA1Q8IWL2 248 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 ADGRG2Q8IZP9 1017 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 SPEM1Q8N4L4 309 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 GBP4Q96PP9 640 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 KLF16Q9BXK1 252 aaPredicted RBP17.35■□□□□ 0.37
DDX41-213ENST00000512027 ULBP1Q9BZM6 244 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 HESX1Q9UBX0 185 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 CFAP54Q96N23 3096 aa17.35■□□□□ 0.37
DDX41-213ENST00000512027 E2F8A0AVK6 867 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 XPO1O14980 1071 aaKnown RBP17.34■□□□□ 0.37
DDX41-213ENST00000512027 GREM1O60565 184 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 ATP5C1P36542 298 aaKnown RBP17.34■□□□□ 0.37
DDX41-213ENST00000512027 SLC6A11P48066 632 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 RGS7P49802 495 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 GCNT1Q02742 428 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 ADIGQ0VDE8 80 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 NR1H3Q13133 447 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 LY6G5CQ5SRR4 150 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 BHLHA9Q7RTU4 235 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 MIB1Q86YT6 1006 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 IER2Q9BTL4 223 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 UBE2TQ9NPD8 197 aaPredicted RBP17.34■□□□□ 0.37
DDX41-213ENST00000512027 RASAL2Q9UJF2 1139 aa17.34■□□□□ 0.37
DDX41-213ENST00000512027 K7ESF4 209 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms