RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 KRT9P35527 623 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ATP5C1P36542 298 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 GPD2P43304 727 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ACADSBP45954 432 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 PGFP49763 221 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 POLR2FP61218 127 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 PRKCQQ04759 706 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 MTF1Q14872 753 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 MLF2Q15773 248 aaPredicted RBP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF77Q15935 545 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 PM20D1Q6GTS8 502 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 PMF1Q6P1K2 205 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 DENND1BQ6P3S1 775 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 KLHDC10Q6PID8 442 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SCD5Q86SK9 330 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SLC47A2Q86VL8 602 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SUGP1Q8IWZ8 645 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SIX6OS1Q8N1H7 587 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SCML4Q8N228 414 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 FBXL6Q8N531 539 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF276Q8N554 614 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 KIAA1958Q8N8K9 716 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 TTC16Q8NEE8 873 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 NEK11Q8NG66 645 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CSGALNACT1Q8TDX6 532 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SH3RF2Q8TEC5 729 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 STK32AQ8WU08 396 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 HSFY1Q96LI6 401 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CDK5RAP1Q96SZ6 601 aaKnown RBP7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ULBP1Q9BZM6 244 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 GANQ9H2C0 597 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 LHX5Q9H2C1 402 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CCSER2Q9H7U1 834 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ACP6Q9NPH0 428 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CYLDQ9NQC7 956 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CNGB3Q9NQW8 809 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 OSER1Q9NX31 292 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 SMPD4Q9NXE4 827 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CLIC5Q9NZA1 410 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 DNMT3LQ9UJW3 386 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 NAGPAQ9UK23 515 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 PCDHGC3Q9UN70 934 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 CPQQ9Y646 472 aa7.52□□□□□ -1.21
PDLIM5-215ENST00000511586 GREB1Q4ZG55 1949 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 E2F8A0AVK6 867 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ARNTLO00327 626 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 EPHB6O15197 1021 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 TEX33O43247 280 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 GABBR2O75899 941 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 FBXO21O94952 628 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 TBX18O95935 607 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 PDGFBP01127 241 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 LCP1P13796 627 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 STAT1P42224 750 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 RGS7P49802 495 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 CLCN5P51795 746 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 KPNA1P52294 538 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 SNX16P57768 344 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 STARD6P59095 220 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 YWHAGP61981 247 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ZXDBP98169 803 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 GOLGA8FQ08AF8 430 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 GOLGA8DPQ0D2H9 430 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ADIGQ0VDE8 80 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 USP4Q13107 963 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 PDGFRLQ15198 375 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 C10orf120Q5SQS8 335 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 IER5LQ5T953 404 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 BSPRYQ5W0U4 402 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ZNF852Q6ZMS4 543 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 TPRG1Q6ZUI0 275 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 RSRC2Q7L4I2 434 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 RNF214Q8ND24 703 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 FLCNQ8NFG4 579 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 RIN3Q8TB24 985 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 OSCP1Q8WVF1 389 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 IRGQQ8WZA9 623 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 GOLGA1Q92805 767 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 MSANTD3Q96H12 275 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ZFYVE19Q96K21 471 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 SPAG5Q96R06 1193 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 FAM83CQ9BQN1 747 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 KLF16Q9BXK1 252 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 SLC4A5Q9BY07 1137 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 PDCL3Q9H2J4 239 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 C8orf33Q9H7E9 229 aaPredicted RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 NMUR1Q9HB89 426 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 NLRC4Q9NPP4 1024 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 ST7Q9NRC1 585 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 HEBP1Q9NRV9 189 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 DUS2Q9NX74 493 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 CFAP97Q9P2B7 532 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 MRPS17Q9Y2R5 130 aaKnown RBP7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 CEP83Q9Y592 693 aa7.51□□□□□ -1.21
PDLIM5-215ENST00000511586 BDP1A6H8Y1 2624 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms