RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ZRANB2O95218 330 aaKnown RBP eCLIP8.19□□□□□ -1.1
USP53-206ENST00000510737 MPGP29372 298 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 CDKN1CP49918 316 aaPredicted RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 BMPR2Q13873 1038 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 KIF22Q14807 665 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 ZNF551Q7Z340 670 aaPredicted RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 TINAGL1Q9GZM7 467 aaPredicted RBP8.19□□□□□ -1.1
USP53-206ENST00000510737 CFAP97Q9P2B7 532 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 BTBD3Q9Y2F9 522 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 SZT2Q5T011 3432 aa8.19□□□□□ -1.1
USP53-206ENST00000510737 SCN4AP35499 1836 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 SHTN1A0MZ66 631 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 KATNA1O75449 491 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 CHEK2O96017 543 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 GNAI3P08754 354 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 KELP23276 732 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 EPHB2P29323 1055 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 CD6P30203 668 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 ADKP55263 362 aaKnown RBP8.18□□□□□ -1.1
USP53-206ENST00000510737 GNAI1P63096 354 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 ETFDHQ16134 617 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 SH2D3AQ9BRG2 576 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 BRIP1Q9BX63 1249 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 QTRT1Q9BXR0 403 aaKnown RBP8.18□□□□□ -1.1
USP53-206ENST00000510737 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 ARHGEF3Q9NR81 526 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 NARFQ9UHQ1 456 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 PCDHA3Q9Y5H8 950 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 ZNF831Q5JPB2 1677 aa8.18□□□□□ -1.1
USP53-206ENST00000510737 FYB1O15117 783 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 RARBP10826 455 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 ITGALP20701 1170 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 PIK3CGP48736 1102 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 GUCY2FP51841 1108 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 SP2Q02086 613 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 ITKQ08881 620 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 SLC44A4Q53GD3 710 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 MAVSQ7Z434 540 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 ZNF48Q96MX3 618 aaPredicted RBP8.17□□□□□ -1.1
USP53-206ENST00000510737 SH3BP4Q9P0V3 963 aa8.17□□□□□ -1.1
USP53-206ENST00000510737 H0YIZ8 118 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 TNKSO95271 1327 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 SMARCA1P28370 1054 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 EPS15P42566 896 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 GCLCP48506 637 aaPredicted RBP8.16□□□□□ -1.1
USP53-206ENST00000510737 SOS1Q07889 1333 aaPredicted RBP8.16□□□□□ -1.1
USP53-206ENST00000510737 MAPK7Q13164 816 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 FER1L6Q2WGJ9 1857 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 SUPT20HL1Q3ZLR7 823 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 CEP78Q5JTW2 689 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 CEP85Q6P2H3 762 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 YTHDF3Q7Z739 585 aaKnown RBP8.16□□□□□ -1.1
USP53-206ENST00000510737 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 GPC2Q8N158 579 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 ZBTB9Q96C00 473 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 MTMR8Q96EF0 704 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 TONSLQ96HA7 1378 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 NRXN2Q9P2S2 1712 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 MRFAP1Q9Y605 127 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 RAD54BQ9Y620 910 aa8.16□□□□□ -1.1
USP53-206ENST00000510737 SFPQP23246 707 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP53-206ENST00000510737 LIPAP38571 399 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 ZNF134P52741 427 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 OLFM4Q6UX06 510 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 USP37Q86T82 979 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP53-206ENST00000510737 C3orf20Q8ND61 904 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 DLL3Q9NYJ7 618 aa8.15□□□□□ -1.1
USP53-206ENST00000510737 AFDNP55196 1824 aaKnown RBP8.15□□□□□ -1.11
USP53-206ENST00000510737 NCAPD2Q15021 1401 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 SOAT2O75908 522 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 CELF2O95319 508 aaKnown RBP8.14□□□□□ -1.11
USP53-206ENST00000510737 RPLP2P05387 115 aaKnown RBP8.14□□□□□ -1.11
USP53-206ENST00000510737 FAM163BP0C2L3 166 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 PRR5LQ6MZQ0 368 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 CTU1Q7Z7A3 348 aaKnown RBP8.14□□□□□ -1.11
USP53-206ENST00000510737 PPP1R3BQ86XI6 285 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 ATRIPQ8WXE1 791 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 MRPL46Q9H2W6 279 aaKnown RBP8.14□□□□□ -1.11
USP53-206ENST00000510737 GNL3LQ9NVN8 582 aaKnown RBP8.14□□□□□ -1.11
USP53-206ENST00000510737 RNF186Q9NXI6 227 aa8.14□□□□□ -1.11
USP53-206ENST00000510737 CUL9Q8IWT3 2517 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 FLT4P35916 1363 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 JTBO76095 146 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 CYP19A1P11511 503 aaPredicted RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 NDUFB7P17568 137 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 CDK11BP21127 795 aaKnown RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 CLCN2P51788 898 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 NOGQ13253 232 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 TMEM108Q6UXF1 575 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 USP50Q70EL3 339 aaPredicted RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 TNPO1Q92973 898 aaKnown RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 RPL36ALQ969Q0 106 aaKnown RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 PUS7Q96PZ0 661 aaKnown RBP8.13□□□□□ -1.11
USP53-206ENST00000510737 SEMA4CQ9C0C4 833 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 SPC25Q9HBM1 224 aa8.13□□□□□ -1.11
USP53-206ENST00000510737 COL6A3P12111 3177 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms