RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
CCHCR1-228ENST00000509552 DPYSL4O14531 572 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 ZBED1O96006 694 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 SNX16P57768 344 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 PPIL2Q13356 520 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 RAB6CQ53S08 254 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 SYCP2LQ5T4T6 812 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 C12orf29Q8N999 325 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 APOPT1Q96IL0 206 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 TBCBQ99426 244 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 KLC2Q9H0B6 622 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 RAB6CQ9H0N0 254 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 ZFP69BQ9UJL9 534 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 COL1A2P08123 1366 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 DDNO94850 711 aaPredicted RBP18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 ANP32DO95626 131 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 PFKMP08237 780 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 FAAP100Q0VG06 881 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 FAM172AQ8WUF8 416 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 RTP4Q96DX8 246 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 TMEM237Q96Q45 408 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 PNPLA8Q9NP80 782 aa18.67■□□□□ 0.58
CCHCR1-228ENST00000509552 TSPAN1O60635 241 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 WFS1O76024 890 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 NEFHP12036 1026 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 GJC2Q5T442 439 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 ZNF276Q8N554 614 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 USP6NLQ92738 828 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 CFAP36Q96G28 342 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 TRIM55Q9BYV6 548 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 PCDH18Q9HCL0 1135 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 ZSWIM8A7E2V4 1837 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 BCLAF3A2AJT9 711 aaKnown RBP18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 SETSIPP0DME0 302 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 IL4RP24394 825 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 RBL1P28749 1068 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 SLC6A3Q01959 620 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 CBLBQ13191 982 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 TAF1BQ53T94 588 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 PPP1R26Q5T8A7 1209 aaPredicted RBP18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 ZNF449Q6P9G9 518 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 OLFML1Q6UWY5 402 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 SLC26A11Q86WA9 606 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 GPATCH11Q8N954 259 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 NLGN2Q8NFZ4 835 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 C12orf65Q9H3J6 166 aaKnown RBP18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 GPATCH2LQ9NWQ4 482 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 HESX1Q9UBX0 185 aa18.66■□□□□ 0.58
CCHCR1-228ENST00000509552 AVILO75366 819 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ELF1P32519 619 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SLC18A2Q05940 514 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ACCSLQ4AC99 568 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 TTC39BQ5VTQ0 682 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SLC9A4Q6AI14 798 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 PMF1Q6P1K2 205 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SESTD1Q86VW0 696 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 CHSY1Q86X52 802 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SHCBP1Q8NEM2 672 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 PPTC7Q8NI37 304 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 AFG1LQ8WV93 481 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 UTP4Q969X6 686 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 RSRC1Q96IZ7 334 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SERAC1Q96JX3 654 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 TSSK1BQ9BXA7 367 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 IQCGQ9H095 443 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 UTRNP46939 3433 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 HNRNPCL1O60812 293 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 PYGBP11216 843 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 GRM5P41594 1212 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 NEK3P51956 506 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 YWHAZP63104 245 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 LGSNQ5TDP6 509 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 C4orf22Q6V702 233 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 MOB2Q70IA6 237 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 MTDHQ86UE4 582 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 CTAGE3PQ8IX95 158 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 PQLC3Q8N755 202 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 N4BP2L2Q92802 583 aaPredicted RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SGIP1Q9BQI5 828 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ZNF670Q9BS34 389 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SNRNP25Q9BV90 132 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ALG13Q9NP73 1137 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 SAR1AQ9NR31 198 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ETNK2Q9NVF9 386 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 ZC3H7BQ9UGR2 993 aaKnown RBP18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 DCTN4Q9UJW0 460 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 C15orf41Q9Y2V0 281 aa18.65■□□□□ 0.58
CCHCR1-228ENST00000509552 MDM4O15151 490 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 KRT37O76014 449 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 ZNF286BP0CG31 522 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 T-ENOLP0DO92 83 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 OVGP1Q12889 678 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 TMEM110Q86TL2 294 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 ACOT1Q86TX2 421 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 LRRC6Q86X45 466 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 PCDH19Q8TAB3 1148 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 TTC17Q96AE7 1141 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 OPTNQ96CV9 577 aa18.64■□□□□ 0.57
CCHCR1-228ENST00000509552 FAM111AQ96PZ2 611 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms