RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TICRRQ7Z2Z1 1910 aa17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 ZFHX2Q9C0A1 2572 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-212ENST00000509333 A0A1W2PQH9 124 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 COL4A2P08572 1712 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 IFNAR2P48551 515 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 AMPD2Q01433 879 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 MTAPQ13126 283 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 DGKKQ5KSL6 1271 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 DPY19L2P1Q6NXN4 242 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 GBP6Q6ZN66 633 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 ENOX1Q8TC92 643 aaKnown RBP17■□□□□ 0.31
PDLIM5-212ENST00000509333 SLC35F5Q8WV83 523 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 WBP2Q969T9 261 aa17■□□□□ 0.31
PDLIM5-212ENST00000509333 KLF16Q9BXK1 252 aaPredicted RBP17■□□□□ 0.31
PDLIM5-212ENST00000509333 SAMSN1Q9NSI8 373 aaKnown RBP17■□□□□ 0.31
PDLIM5-212ENST00000509333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17■□□□□ 0.31
PDLIM5-212ENST00000509333 E2F8A0AVK6 867 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 GTPBP10A4D1E9 387 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 PROB1E7EW31 1015 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 XPO1O14980 1071 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 CYP26A1O43174 497 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 TLR5O60602 858 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 GABBR2O75899 941 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 CALCAP01258 141 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 SP9P0CG40 484 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 RARGP13631 454 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 PON1P27169 355 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 ATP5C1P36542 298 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 NBL1P41271 181 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 PSEN1P49768 467 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 NR1H3Q13133 447 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 CCINQ13939 588 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 GOLGA7BQ2TAP0 167 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 TMEM196Q5HYL7 178 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 KLHDC10Q6PID8 442 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 RHBDF2Q6PJF5 856 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 CPA6Q8N4T0 437 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 KCTD13Q8WZ19 329 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 ATP2A3Q93084 1043 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 RBM12Q9NTZ6 932 aaKnown RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 CLIC5Q9NZA1 410 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 HESX1Q9UBX0 185 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 NUDT5Q9UKK9 219 aa16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 PTPRZ1P23471 2315 aaPredicted RBP16.99■□□□□ 0.31
PDLIM5-212ENST00000509333 SLC9A3R1O14745 358 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 LAMTOR5O43504 91 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 GREM1O60565 184 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 TKTL1P51854 596 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 SLC8A3P57103 927 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 APBA1Q02410 837 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 MAN2A1Q16706 1144 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 EXOC3L4Q17RC7 722 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 GAB4Q2WGN9 574 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 VWA3BQ502W6 1294 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 FSTL4Q6MZW2 842 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 GJB7Q6PEY0 223 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 TRIM65Q6PJ69 517 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 HTR3DQ70Z44 454 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 ALYREFQ86V81 257 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 DDX42Q86XP3 938 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 FAM114A1Q8IWE2 563 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 SYNPOQ8N3V7 929 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 RBBP8NLQ8NC74 664 aaPredicted RBP16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 NDRG1Q92597 394 aaKnown RBP16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 TUBGCP2Q9BSJ2 902 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 NDST4Q9H3R1 872 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 TBC1D14Q9P2M4 693 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 FBXO4Q9UKT5 387 aa16.98■□□□□ 0.31
PDLIM5-212ENST00000509333 RIF1Q5UIP0 2472 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 SCAMP3O14828 347 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 PLA2G4AP47712 749 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 BCAT1P54687 386 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 MFAP3P55082 362 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 BST2Q10589 180 aaKnown RBP16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 KCNMA1Q12791 1236 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 DHCR24Q15392 516 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 ZNF528Q3MIS6 628 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 HSP90AA4PQ58FG1 418 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 MIIPQ5JXC2 388 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 PMF1Q6P1K2 205 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 ENOSF1Q7L5Y1 443 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 NELL1Q92832 810 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 SIX2Q9NPC8 291 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 DNMT3LQ9UJW3 386 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 NAGPAQ9UK23 515 aa16.97■□□□□ 0.31
PDLIM5-212ENST00000509333 MIA3Q5JRA6 1907 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 NFATC1O95644 943 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 MBD3O95983 291 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 ZBED1O96006 694 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 BRD2P25440 801 aaKnown RBP16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 CSTF1Q05048 431 aaKnown RBP16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 GRSF1Q12849 480 aaKnown RBP eCLIP16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 LRRC32Q14392 662 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 STILQ15468 1287 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 TCP11X2Q5H9J9 407 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 SMYD5Q6GMV2 418 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 BHLHA9Q7RTU4 235 aa16.96■□□□□ 0.31
PDLIM5-212ENST00000509333 SPEM1Q8N4L4 309 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms