RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 DPYSL4O14531 572 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 TRIM66O15016 1216 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 COCHO43405 550 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 GREM1O60565 184 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 GFRA3O60609 400 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 FGF19O95750 216 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 CAVIN2O95810 425 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ZDHHC11BP0C7U3 371 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 CHRM1P11229 460 aaPredicted RBP9.16□□□□□ -0.94
SNCA-211ENST00000508895 HDCP19113 662 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 SLC9A1P19634 815 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ACO1P21399 889 aaKnown RBP9.16□□□□□ -0.94
SNCA-211ENST00000508895 PON1P27169 355 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 NBL1P41271 181 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 SATB1Q01826 763 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ZNF268Q14587 947 aaPredicted RBP9.16□□□□□ -0.94
SNCA-211ENST00000508895 MAPRE1Q15691 268 aaKnown RBP9.16□□□□□ -0.94
SNCA-211ENST00000508895 EXOC3L4Q17RC7 722 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 EML3Q32P44 896 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ARHGAP29Q52LW3 1261 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 GJB7Q6PEY0 223 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ZNF852Q6ZMS4 543 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 GBP6Q6ZN66 633 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 BHLHA9Q7RTU4 235 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 SCD5Q86SK9 330 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 C12orf40Q86WS4 652 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 TTC30AQ86WT1 665 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 YAF2Q8IY57 180 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 NUP93Q8N1F7 819 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 PPM1KQ8N3J5 372 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 FBXO32Q969P5 355 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 CYFIP2Q96F07 1278 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 FAXDC2Q96IV6 333 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 GCNAQ96QF7 691 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 HNRNPABQ99729 332 aaKnown RBP9.16□□□□□ -0.94
SNCA-211ENST00000508895 VPS16Q9H269 839 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 CYP3A43Q9HB55 503 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 APEX2Q9UBZ4 518 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 CPQQ9Y646 472 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 ABCA7Q8IZY2 2146 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 SPAG17Q6Q759 2223 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 TRAV19A0A0A6YYK7 116 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SMTNL1A8MU46 457 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 BECN2A8MW95 431 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 PROB1E7EW31 1015 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 PES1O00541 588 aaKnown RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 CYP26A1O43174 497 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 ABL1P00519 1130 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 EGFP01133 1207 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 CKMP06732 381 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 RFX1P22670 979 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 TBXAS1P24557 533 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 DDX6P26196 483 aaKnown RBP eCLIP9.15□□□□□ -0.94
SNCA-211ENST00000508895 ANXA13P27216 316 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 YWHAQP27348 245 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 AVPR1AP37288 418 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 OPRD1P41143 372 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SLC6A11P48066 632 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 KLK7P49862 253 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 KPNA1P52294 538 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 NUBP1P53384 320 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 GCNT1Q02742 428 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 CSTF1Q05048 431 aaKnown RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 CETN1Q12798 172 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SRSF5Q13243 272 aaKnown RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 RUNX3Q13761 415 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 MTF1Q14872 753 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 RRAGAQ7L523 313 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 UNC93AQ86WB7 457 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 NELL1Q92832 810 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 E2F7Q96AV8 911 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SMARCD1Q96GM5 515 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SHDQ96IW2 340 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 NT5C1AQ9BXI3 368 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 OSBPL6Q9BZF3 934 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 GANQ9H2C0 597 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 CHRDQ9H2X0 955 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 FAM124BQ9H5Z6 455 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 DMAP1Q9NPF5 467 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 PRMT8Q9NR22 394 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 SPATA6Q9NWH7 488 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 TRPM5Q9NZQ8 1165 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 UXTQ9UBK9 157 aaPredicted RBP9.15□□□□□ -0.94
SNCA-211ENST00000508895 ARHGAP26Q9UNA1 814 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SIK3Q9Y2K2 1263 aa9.15□□□□□ -0.94
SNCA-211ENST00000508895 SETXQ7Z333 2677 aaKnown RBP9.15□□□□□ -0.95
SNCA-211ENST00000508895 A0A1W2PQH9 124 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 PRR23AA6NEV1 266 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 LRRC10BA6NIK2 292 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 K7ESF4 209 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 TRIM24O15164 1050 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 EPHB6O15197 1021 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 CYP17A1P05093 508 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 IRF1P10914 325 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 TCF3P15923 654 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 GJA4P35212 333 aa9.14□□□□□ -0.95
SNCA-211ENST00000508895 RPS9P46781 194 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms