RNA–Protein interactions for RNA: ENST00000508692.1

COL4A3BP-205, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-205ENST00000508692 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 VPS51Q9UID3 782 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 NFU1Q9UMS0 254 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 HS3ST4Q9Y661 456 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 COL15A1P39059 1388 aa4.36□□□□□ -1.71
COL4A3BP-205ENST00000508692 TRIM38O00635 465 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 FCHO1O14526 889 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 PROM1O43490 865 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ASNA1O43681 348 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 SH3BP5O60239 455 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ACTL6BO94805 426 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 PRKCBP05771 671 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ANXA6P08133 673 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 HGFP14210 728 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 VEGFAP15692 232 aaPredicted RBP4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 LMO1P25800 156 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZEB1P37275 1124 aaPredicted RBP4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ADCK5Q3MIX3 580 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 CCDC70Q6NSX1 233 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 CYP26C1Q6V0L0 522 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 LNX2Q8N448 690 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 TMEM171Q8WVE6 324 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 HAS1Q92839 578 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 SDCCAG3Q96C92 435 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 EVI5LQ96CN4 794 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 PGBD1Q96JS3 809 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 C17orf80Q9BSJ5 609 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 RTKNQ9BST9 563 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 ALG8Q9BVK2 526 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 VN1R3Q9BXE9 311 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 GLOD4Q9HC38 313 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 KIF17Q9P2E2 1029 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 NKX1-2Q9UD57 310 aaPredicted RBP4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 STEAP1Q9UHE8 339 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 SH2B3Q9UQQ2 575 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 SNX14Q9Y5W7 946 aa4.35□□□□□ -1.71
COL4A3BP-205ENST00000508692 PNMA6EA0A0J9YXQ4 647 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 EFCAB8A8MWE9 144 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 M0R3H8 397 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 IPO5O00410 1097 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 PPM1DO15297 605 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 USP1O94782 785 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SPDEFO95238 335 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 TNFRSF6BO95407 300 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ARP10275 920 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 PPP3CBP16298 524 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 CST5P28325 142 aaPredicted RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ADORA2AP29274 412 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATXN1P54253 815 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 AP2B1P63010 937 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC25A3Q00325 362 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 EFR3AQ14156 821 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 CSHL1Q14406 222 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 TAF12Q16514 161 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ST3GAL2Q16842 350 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZNF618Q5T7W0 954 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 DEPDC1Q5TB30 811 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ANKRD45Q5TZF3 282 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ABHD17BQ5VST6 288 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SULT6B1Q6IMI4 303 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 JMJD6Q6NYC1 403 aaPredicted RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 VWA1Q6PCB0 445 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 CLEC9AQ6UXN8 241 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 RAB11FIP2Q7L804 512 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC44A2Q8IWA5 706 aaPredicted RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 NGDNQ8NEJ9 315 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SLC30A5Q8TAD4 765 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SUN3Q8TAQ9 357 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SPPL3Q8TCT6 385 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ATG4AQ8WYN0 398 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 VOPP1Q96AW1 172 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 AGAP2Q99490 1192 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ADAM2Q99965 735 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 TTPALQ9BTX7 342 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 DDX23Q9BUQ8 820 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 PABPC3Q9H361 631 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 AS3MTQ9HBK9 375 aa4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 TESQ9UGI8 421 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 DRG1Q9Y295 367 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 LRRFIP2Q9Y608 721 aaKnown RBP4.34□□□□□ -1.71
COL4A3BP-205ENST00000508692 ZAR1LA6NP61 321 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 HMGB1P1B2RPK0 211 aaPredicted RBP4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 ADM5C9JUS6 153 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 KIAA0355O15063 1070 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 DNPH1O43598 174 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 FAM155BO75949 473 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 NXPH3O95157 252 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 NR4A1P22736 598 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 MAPK9P45984 424 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 CDK7P50613 346 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 DGKQP52824 942 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 SCAPQ12770 1279 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 PTPRRQ15256 657 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 SF3B3Q15393 1217 aaKnown RBP4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 NBPF8Q3BBV2 869 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 FBXO47Q5MNV8 452 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 LY6G5CQ5SRR4 150 aa4.33□□□□□ -1.72
COL4A3BP-205ENST00000508692 FNDC7Q5VTL7 733 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms