RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 WDR5BQ86VZ2 330 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 P2RY11Q96G91 374 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 TSG101Q99816 390 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 DUSP9Q99956 384 aaKnown RBP13.54□□□□□ -0.24
NR1I3-225ENST00000508387 SLC8A2Q9UPR5 921 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 CTNND2Q9UQB3 1225 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 OTOGLQ3ZCN5 2332 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 FAM186AA6NE01 2351 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 GPR179Q6PRD1 2367 aa13.54□□□□□ -0.24
NR1I3-225ENST00000508387 PPP1R3GB7ZBB8 358 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 GREM1O60565 184 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 CALCAP01258 141 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 ADH5P11766 374 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 STX17P56962 302 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 FKBP3Q00688 224 aaKnown RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 DMC1Q14565 340 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 LY6G5CQ5SRR4 150 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 EMC10Q5UCC4 262 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 SCD5Q86SK9 330 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 TTC30AQ86WT1 665 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 PHTF2Q8N3S3 785 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 CCDC33Q8N5R6 958 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 FAM160A2Q8N612 972 aaPredicted RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 NAT16Q8N8M0 369 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 NDRG1Q92597 394 aaKnown RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 KAT5Q92993 513 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 CCDC34Q96HJ3 373 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 HEXIM2Q96MH2 286 aaKnown RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 USP18Q9UMW8 372 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 SCML2Q9UQR0 700 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 SH3BP1Q9Y3L3 701 aa13.53□□□□□ -0.24
NR1I3-225ENST00000508387 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.53□□□□□ -0.24
NR1I3-225ENST00000508387 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.24
NR1I3-225ENST00000508387 E2F8A0AVK6 867 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 DCLK1O15075 740 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 TUBP50607 506 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 KIF11P52732 1056 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 AMPD2Q01433 879 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 LRRC63Q05C16 580 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 NR1H3Q13133 447 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 RSPO4Q2I0M5 234 aaPredicted RBP13.52□□□□□ -0.25
NR1I3-225ENST00000508387 GOLGA7BQ2TAP0 167 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 LAIR1Q6GTX8 287 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 TTI2Q6NXR4 508 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 CEP68Q76N32 757 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.25
NR1I3-225ENST00000508387 UBR7Q8N806 425 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 USP33Q8TEY7 942 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 NELFBQ8WX92 580 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 KLF16Q9BXK1 252 aaPredicted RBP13.52□□□□□ -0.25
NR1I3-225ENST00000508387 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 TPSD1Q9BZJ3 242 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 NACA2Q9H009 215 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 FBXO44Q9H4M3 255 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 TLR8Q9NR97 1041 aaKnown RBP13.52□□□□□ -0.25
NR1I3-225ENST00000508387 COMMD8Q9NX08 183 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 ARMCX3Q9UH62 379 aaPredicted RBP13.52□□□□□ -0.25
NR1I3-225ENST00000508387 INVSQ9Y283 1065 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 COQ4Q9Y3A0 265 aa13.52□□□□□ -0.25
NR1I3-225ENST00000508387 LAMA1P25391 3075 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 RARGP13631 454 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 TIE1P35590 1138 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 CUL2Q13617 745 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 MORC3Q14149 939 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 FBXO43Q4G163 708 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 SYT13Q7L8C5 426 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 PIGZQ86VD9 579 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 TMEM25Q86YD3 366 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 ETFBKMTQ8IXQ9 262 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 ALLCQ8N6M5 410 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 GAB3Q8WWW8 586 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 ERLEC1Q96DZ1 483 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 SMOC1Q9H4F8 434 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 CYLDQ9NQC7 956 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
NR1I3-225ENST00000508387 NAGPAQ9UK23 515 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 HCN2Q9UL51 889 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 RAB23Q9ULC3 237 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 USP3Q9Y6I4 520 aa13.51□□□□□ -0.25
NR1I3-225ENST00000508387 RIF1Q5UIP0 2472 aaKnown RBP13.51□□□□□ -0.25
NR1I3-225ENST00000508387 SLC9A3R1O14745 358 aaPredicted RBP13.5□□□□□ -0.25
NR1I3-225ENST00000508387 PSMA7O14818 248 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 STX10O60499 249 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 ATG13O75143 517 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 RPP40O75818 363 aaKnown RBP13.5□□□□□ -0.25
NR1I3-225ENST00000508387 KAT7O95251 611 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 ADH1CP00326 375 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 HMBSP08397 361 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 HOXA6P31267 233 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 FMO5P49326 533 aa13.5□□□□□ -0.25
NR1I3-225ENST00000508387 ANO4Q32M45 955 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms