RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CHORDC1Q9UHD1 332 aaPredicted RBP21.08■□□□□ 0.97
USP53-203ENST00000507597 NAGPAQ9UK23 515 aa21.08■□□□□ 0.97
USP53-203ENST00000507597 ZNF840PA6NDX5 716 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 DDX3XO00571 662 aaKnown RBP eCLIP21.07■□□□□ 0.964e-7■■■□□ 17.9
USP53-203ENST00000507597 CAPN9O14815 690 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 PTMAP06454 111 aaKnown RBP21.07■□□□□ 0.96
USP53-203ENST00000507597 YWHAGP61981 247 aaKnown RBP eCLIP21.07■□□□□ 0.96
USP53-203ENST00000507597 GOLGA8FQ08AF8 430 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 GOLGA8DPQ0D2H9 430 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 SMAD2Q15796 467 aaKnown RBP21.07■□□□□ 0.96
USP53-203ENST00000507597 PTPN20Q4JDL3 420 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 PRSS36Q5K4E3 855 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 CCDC122Q5T0U0 273 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 ALKBH5Q6P6C2 394 aaKnown RBP21.07■□□□□ 0.96
USP53-203ENST00000507597 GAREM2Q75VX8 874 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 GET4Q7L5D6 327 aaPredicted RBP21.07■□□□□ 0.96
USP53-203ENST00000507597 SLC30A5Q8TAD4 765 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.07■□□□□ 0.96
USP53-203ENST00000507597 RNF139Q8WU17 664 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 FAM149B1Q96BN6 582 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 IL21Q9HBE4 155 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 GMIPQ9P107 970 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 CDH7Q9ULB5 785 aa21.07■□□□□ 0.96
USP53-203ENST00000507597 TRAV19A0A0A6YYK7 116 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 ANKRD62A6NC57 917 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 GRXCR2A6NFK2 248 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 LTFP02788 710 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 FTLP02792 175 aaPredicted RBP21.06■□□□□ 0.96
USP53-203ENST00000507597 ZDHHC11BP0C7U3 371 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 GBP2P32456 591 aaPredicted RBP21.06■□□□□ 0.96
USP53-203ENST00000507597 AVPR1AP37288 418 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 NTHL1P78549 312 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 SLC6A3Q01959 620 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 SPA17Q15506 151 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 GPR158Q5T848 1215 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 RSRC2Q7L4I2 434 aaKnown RBP21.06■□□□□ 0.96
USP53-203ENST00000507597 BEND5Q7L4P6 421 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 TXLNBQ8N3L3 684 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 SHKBP1Q8TBC3 707 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 E2F7Q96AV8 911 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 POMKQ9H5K3 350 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 CYTH4Q9UIA0 394 aa21.06■□□□□ 0.96
USP53-203ENST00000507597 CDH23Q9H251 3354 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 TMCO5BA8MYB1 307 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 PIK3R2O00459 728 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 HSF2BPO75031 334 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 ATP5C1P36542 298 aaKnown RBP21.05■□□□□ 0.96
USP53-203ENST00000507597 GSCP56915 257 aaPredicted RBP21.05■□□□□ 0.96
USP53-203ENST00000507597 YWHAZP63104 245 aaKnown RBP21.05■□□□□ 0.96
USP53-203ENST00000507597 TEAD2Q15562 447 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 BSPRYQ5W0U4 402 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 MCOLN2Q8IZK6 566 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 CHP1Q99653 195 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 C11orf70Q9BRQ4 267 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 ISCUQ9H1K1 167 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 POPDC2Q9HBU9 364 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 TRPC7Q9HCX4 862 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 MRPL47Q9HD33 250 aaKnown RBP21.05■□□□□ 0.96
USP53-203ENST00000507597 RRN3Q9NYV6 651 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 PRKAG3Q9UGI9 489 aa21.05■□□□□ 0.96
USP53-203ENST00000507597 A0A087X0T9 212 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 A0A1W2PQH9 124 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 PAPSS1O43252 624 aaPredicted RBP21.04■□□□□ 0.96
USP53-203ENST00000507597 ERBB2P04626 1255 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 PLEKP08567 350 aaPredicted RBP21.04■□□□□ 0.96
USP53-203ENST00000507597 FAM228BP0C875 321 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 RARGP13631 454 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 HDCP19113 662 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 WEE1P30291 646 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 FAM102AQ5T9C2 384 aaPredicted RBP21.04■□□□□ 0.96
USP53-203ENST00000507597 KLHDC10Q6PID8 442 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 MMS22LQ6ZRQ5 1243 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 SLC26A9Q7LBE3 791 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 TDRD5Q8NAT2 981 aaKnown RBP21.04■□□□□ 0.96
USP53-203ENST00000507597 ITFG1Q8TB96 612 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 FGF13Q92913 245 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 TCEAL4Q96EI5 215 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 SELENOOQ9BVL4 669 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 PARVAQ9NVD7 372 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 SCINQ9Y6U3 715 aa21.04■□□□□ 0.96
USP53-203ENST00000507597 DPYSL4O14531 572 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 TLR5O60602 858 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 CKMP06732 381 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 FECHP22830 423 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 CCR2P41597 374 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 KPNA1P52294 538 aaPredicted RBP21.03■□□□□ 0.96
USP53-203ENST00000507597 CYP4F8P98187 520 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 SLC5A9Q2M3M2 681 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 FAM183BPQ6ZVS7 135 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 MTSS1LQ765P7 747 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 MON1BQ7L1V2 547 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 ARCQ7LC44 396 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 DDX42Q86XP3 938 aaKnown RBP eCLIP21.03■□□□□ 0.96
USP53-203ENST00000507597 XYLT1Q86Y38 959 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 MAB21L3Q8N8X9 362 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 MCRS1Q96EZ8 462 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 KIF9Q9HAQ2 790 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 DNMT3LQ9UJW3 386 aa21.03■□□□□ 0.96
USP53-203ENST00000507597 SZT2Q5T011 3432 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms