RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 XYLT2Q9H1B5 865 aa14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 BCCIPQ9P287 314 aaKnown RBP eCLIP14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 CGNQ9P2M7 1197 aaKnown RBP14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 CHORDC1Q9UHD1 332 aaPredicted RBP14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 MMP17Q9ULZ9 603 aa14.24□□□□□ -0.13
POLR2J3-212ENST00000507355 ADAMTS20P59510 1910 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 MYOFQ9NZM1 2061 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 TAF4O00268 1085 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 SLC9A3R1O14745 358 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 ALDH1A2O94788 518 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 MBL2P11226 248 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 YWHAQP27348 245 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 ME1P48163 572 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 CRY1Q16526 586 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 BMT2Q1RMZ1 405 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 LYSMD4Q5XG99 296 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 RHBDF2Q6PJF5 856 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 TMEM92Q6UXU6 159 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 SYT12Q8IV01 421 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 SFTPA1Q8IWL2 248 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 CHCHD4Q8N4Q1 142 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 ALLCQ8N6M5 410 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 KIAA1958Q8N8K9 716 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 PARD3BQ8TEW8 1205 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 ELMO3Q96BJ8 720 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 KCNK16Q96T55 309 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 PNKPQ96T60 521 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 CFAP97Q9P2B7 532 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 MBD1Q9UIS9 605 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 LOC400499M0QZD8 3231 aa14.23□□□□□ -0.13
POLR2J3-212ENST00000507355 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 RTN3O95197 1032 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 KLF8O95600 359 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 C4BPAP04003 597 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 ITPKAP23677 461 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 P2RY2P41231 377 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 ATXN3P54252 364 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 FAM193AP78312 1265 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 MRPS21P82921 87 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 MESP2Q0VG99 397 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 BIRC3Q13489 604 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 ZNF667Q5HYK9 610 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 EMC10Q5UCC4 262 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 PIP4P1Q86T03 277 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 GRAMD1CQ8IYS0 662 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 DEFB119Q8N690 84 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 TXNDC5Q8NBS9 432 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 OLIG1Q8TAK6 271 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 WHAMMQ8TF30 809 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 HMGB4Q8WW32 186 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 FBXO32Q969P5 355 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 SNX21Q969T3 373 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 SMYD3Q9H7B4 428 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 ZDHHC4Q9NPG8 344 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 SERTAD1Q9UHV2 236 aa14.22□□□□□ -0.13
POLR2J3-212ENST00000507355 FLNBO75369 2602 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 LRRIQ3A6PVS8 624 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 KLRC4O43908 158 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 CLSTN1O94985 981 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 VNN1O95497 513 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 F13A1P00488 732 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 TIE1P35590 1138 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 AP3M2P53677 418 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 STK4Q13043 487 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 SEMA3BQ13214 749 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 ZNF699Q32M78 642 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 C12orf40Q86WS4 652 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 PROSER1Q86XN7 944 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 DDX42Q86XP3 938 aaKnown RBP eCLIP14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 CEP57L1Q8IYX8 460 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 PGBD3Q8N328 593 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 PDZD8Q8NEN9 1154 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 OR2I1PQ8NGU4 316 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 OVCA2Q8WZ82 227 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 TNIP3Q96KP6 325 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 SDCBP2Q9H190 292 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 DMAC2Q9NW81 257 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 TBC1D14Q9P2M4 693 aa14.21□□□□□ -0.13
POLR2J3-212ENST00000507355 A0A0A0MRY4 1105 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 E2F8A0AVK6 867 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 SGK1O00141 431 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 COCHO43405 550 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 KAT7O95251 611 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 APODP05090 189 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 RDXP35241 583 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 EIF2DP41214 584 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 CLDN10P78369 228 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 KDSRQ06136 332 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 NCOA4Q13772 614 aa14.2□□□□□ -0.14
POLR2J3-212ENST00000507355 LY6G5CQ5SRR4 150 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms