RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 PIK3AP1Q6ZUJ8 805 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 FAM26EQ8N5C1 309 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 TERB1Q8NA31 727 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 SCFD1Q8WVM8 642 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 TRMT2BQ96GJ1 504 aaKnown RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 VCPIP1Q96JH7 1222 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 MYRFLQ96LU7 910 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 PYM1Q9BRP8 204 aaKnown RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 RNF38Q9H0F5 515 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 CD248Q9HCU0 757 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 TM9SF3Q9HD45 589 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 TRPM5Q9NZQ8 1165 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 USP36Q9P275 1121 aaKnown RBP7.74□□□□□ -1.17
VCAN-207ENST00000507162 DSEQ9UL01 958 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 KCNJ14Q9UNX9 436 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 CPQQ9Y646 472 aa7.74□□□□□ -1.17
VCAN-207ENST00000507162 A0A1B0GTQ1 180 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 DFNA5O60443 496 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 USP12O75317 370 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 IGHDP01880 384 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CYP11A1P05108 521 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 FAM87AP0C7U9 286 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CPA1P15085 419 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 IFNAR1P17181 557 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CTSKP43235 329 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 GRIA4P48058 902 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 PEX3P56589 373 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 INSM1Q01101 510 aaPredicted RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 SSRP1Q08945 709 aaKnown RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 STARD3Q14849 445 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 ZBTB6Q15916 424 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 NTRK3Q16288 839 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 ADCK5Q3MIX3 580 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 FUT11Q495W5 492 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 RNF20Q5VTR2 975 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 GRAMD4Q6IC98 578 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 Q6ZUG5 572 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 METTL3Q86U44 580 aaKnown RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 CATSPER3Q86XQ3 398 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CACUL1Q86Y37 369 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 TMEM25Q86YD3 366 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 TMPRSS6Q8IU80 811 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 DCBLD1Q8N8Z6 715 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 KIFAP3Q92845 792 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 EXTL1Q92935 676 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 BRF1Q92994 677 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 SIPA1Q96FS4 1042 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 AIFM3Q96NN9 605 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 MMS19Q96T76 1030 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 NAP1L4Q99733 375 aaKnown RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 GABRG3Q99928 467 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 MKRN2Q9H000 416 aaKnown RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 C6orf106Q9H6K1 298 aaPredicted RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 PLEKHA5Q9HAU0 1116 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
VCAN-207ENST00000507162 TBC1D14Q9P2M4 693 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 ADAMTS1Q9UHI8 967 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 STARD13Q9Y3M8 1113 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CELSR2Q9HCU4 2923 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 NUMA1Q14980 2115 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 CITO14578 2027 aa7.73□□□□□ -1.17
VCAN-207ENST00000507162 TTC26A0AVF1 554 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 PRRT4C9JH25 899 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 ABLIM1O14639 778 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 SYNCRIPO60506 623 aaKnown RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 MED24O75448 989 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 FSBPO95073 299 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 CLTAP09496 248 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 SPATA31C1P0DKV0 1188 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 MBL2P11226 248 aaPredicted RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 CKMT2P17540 419 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 ITGB6P18564 788 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 PROZP22891 400 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 NPTX2P47972 431 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 ERVPABLB-1P60509 514 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 SLC7A9P82251 487 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 PPP2R3AQ06190 1150 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 NOLC1Q14978 699 aaKnown RBP eCLIP7.72□□□□□ -1.17
VCAN-207ENST00000507162 NPY5RQ15761 445 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 CALCRLQ16602 461 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 NFE2Q16621 373 aaPredicted RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 C9orf57Q5W0N0 161 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 GALNT17Q6IS24 598 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 XKR5Q6UX68 686 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 USP53Q70EK8 1073 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 TAS1R3Q7RTX0 852 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 PTRH1Q86Y79 214 aaKnown RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 ETFBKMTQ8IXQ9 262 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 CACTIN-AS1Q8N1I8 211 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 NSUN7Q8NE18 718 aaKnown RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 PRCCQ92733 491 aaPredicted RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 TMEM134Q9H6X4 195 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 ANO2Q9NQ90 1003 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 KMT5AQ9NQR1 393 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 THSD1Q9NS62 852 aa7.72□□□□□ -1.17
VCAN-207ENST00000507162 DNAJC17Q9NVM6 304 aaKnown RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 PLEKHB1Q9UF11 243 aaPredicted RBP7.72□□□□□ -1.17
VCAN-207ENST00000507162 CRYBG3Q68DQ2 2970 aa7.71□□□□□ -1.17
VCAN-207ENST00000507162 GFRA2O00451 464 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms