RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 RTP3Q9BQQ7 232 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PAAF1Q9BRP4 392 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 HERPUD2Q9BSE4 406 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TRIM51Q9BSJ1 452 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 C11orf84Q9BUA3 381 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 DPH5Q9H2P9 285 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 ZWILCHQ9H900 591 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PRDM16Q9HAZ2 1276 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CSNK1G1Q9HCP0 422 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 MED4Q9NPJ6 270 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CNGB3Q9NQW8 809 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 WHRNQ9P202 907 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 CACNG4Q9UBN1 327 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 MTRF1LQ9UGC7 380 aaKnown RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 PCSK1NQ9UHG2 260 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 SNX24Q9Y343 169 aa8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
COL4A5-208ENST00000505728 TTC28Q96AY4 2481 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CLDN5O00501 218 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 NDC80O14777 642 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 SYN3O14994 580 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 MDM4O15151 490 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 LIASO43766 372 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 OPA1O60313 960 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 DAB1O75553 588 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 GRAP2O75791 330 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 DDHD2O94830 711 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FAM153BP0C7A2 387 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 KRT10P13645 584 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 NOS2P35228 1153 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 MATKP42679 507 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 TKTL1P51854 596 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CDH6P55285 790 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 MAP3K7CLP57077 242 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 YWHAZP63104 245 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CAV1Q03135 178 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 KRT17Q04695 432 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 RNASELQ05823 741 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ADCY1Q08828 1119 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 BYSLQ13895 437 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 TFDP2Q14188 446 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 LLGL1Q15334 1064 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 C15orf59Q2T9L4 293 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FAM153CQ494X1 144 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 HSP90B2PQ58FF3 399 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 RAB41Q5JT25 222 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CFAP58Q5T655 872 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 SCYL2Q6P3W7 929 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 C4orf50Q6ZRC1 276 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CYP4V2Q6ZWL3 525 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ZNF280BQ86YH2 543 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PSTKQ8IV42 348 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 DCP1BQ8IZD4 617 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ABI1Q8IZP0 508 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 IQCKQ8N0W5 287 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 DEFB106AQ8N104 65 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 SIX6OS1Q8N1H7 587 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ZMIZ2Q8NF64 920 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FAM71BQ8TC56 605 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FAM172AQ8WUF8 416 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 ART4Q93070 314 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 NKD2Q969F2 451 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PCED1BQ96HM7 432 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PIWIL1Q96J94 861 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CFAP57Q96MR6 1250 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 GDAP1L1Q96MZ0 367 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PEBP4Q96S96 227 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FMO2Q99518 471 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PKMYT1Q99640 499 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 SMOQ99835 787 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 COLEC11Q9BWP8 271 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 MAK16Q9BXY0 300 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 TRIM31Q9BZY9 425 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 TSPYL1Q9H0U9 437 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PNPLA8Q9NP80 782 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 NGRNQ9NPE2 291 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 TBC1D13Q9NVG8 400 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 KLHL11Q9NVR0 708 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 RRN3Q9NYV6 651 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 FAM153AQ9UHL3 310 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 LRFN2Q9ULH4 789 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 STAP1Q9ULZ2 295 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 R3HDM2Q9Y2K5 976 aaKnown RBP8.41□□□□□ -1.06
COL4A5-208ENST00000505728 CHD7Q9P2D1 2997 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 MYO9BQ13459 2157 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 PTPRDP23468 1912 aa8.41□□□□□ -1.06
COL4A5-208ENST00000505728 GOLGA6BA6NDN3 693 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 HHLA1C9JL84 531 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 APOC4-APOC2K7ER74 178 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 CST8O60676 142 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 PQBP1O60828 265 aaKnown RBP8.4□□□□□ -1.06
COL4A5-208ENST00000505728 PPFIA2O75334 1257 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 TADA2AO75478 443 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 BEST1O76090 585 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 OAZ2O95190 189 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 KRT14P02533 472 aa8.4□□□□□ -1.06
COL4A5-208ENST00000505728 APOC2P02655 101 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms