RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 INTS2Q9H0H0 1204 aaKnown RBP15.02■□□□□ -0
HOXC9-202ENST00000504557 LMBRD1Q9NUN5 540 aa15.02■□□□□ -0
HOXC9-202ENST00000504557 POLR3BQ9NW08 1133 aaPredicted RBP15.02■□□□□ -0
HOXC9-202ENST00000504557 IL37Q9NZH6 218 aa15.02■□□□□ -0
HOXC9-202ENST00000504557 HESX1Q9UBX0 185 aa15.02■□□□□ -0
HOXC9-202ENST00000504557 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
HOXC9-202ENST00000504557 SCML2Q9UQR0 700 aa15.02■□□□□ -0
HOXC9-202ENST00000504557 VPS13AQ96RL7 3174 aa15.02□□□□□ -0.01
HOXC9-202ENST00000504557 RALGAPA1Q6GYQ0 2036 aa15.02□□□□□ -0.01
HOXC9-202ENST00000504557 PIK3R2O00459 728 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 RNF40O75150 1001 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 CYP17A1P05093 508 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 HMBSP08397 361 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 ZDHHC11BP0C7U3 371 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 RARGP13631 454 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 KRT5P13647 590 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 TCF3P15923 654 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 BRD2P25440 801 aaKnown RBP15.01□□□□□ -0.01
HOXC9-202ENST00000504557 ATP5C1P36542 298 aaKnown RBP15.01□□□□□ -0.01
HOXC9-202ENST00000504557 KIF11P52732 1056 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 SEC13P55735 322 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 PDE4CQ08493 712 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 CCINQ13939 588 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 PPP2R5DQ14738 602 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 TMEM196Q5HYL7 178 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 ARHGAP17Q68EM7 881 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 PIGZQ86VD9 579 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 TTC30AQ86WT1 665 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 MIB1Q86YT6 1006 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 SPEM1Q8N4L4 309 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 MLKLQ8NB16 471 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 EHBP1Q8NDI1 1231 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 NDRG1Q92597 394 aaKnown RBP15.01□□□□□ -0.01
HOXC9-202ENST00000504557 CD101Q93033 1021 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 FAXDC2Q96IV6 333 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 GBP4Q96PP9 640 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 MED15Q96RN5 788 aa15.01□□□□□ -0.01
HOXC9-202ENST00000504557 PRMT8Q9NR22 394 aaPredicted RBP15.01□□□□□ -0.01
HOXC9-202ENST00000504557 PTPRZ1P23471 2315 aaPredicted RBP15.01□□□□□ -0.01
HOXC9-202ENST00000504557 FAM186AA6NE01 2351 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 EML5Q05BV3 1969 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 FAM92AA1XBS5 289 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 PROB1E7EW31 1015 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 RNF225M0QZC1 329 aaPredicted RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 TRDMT1O14717 391 aaKnown RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 SLC9A3R1O14745 358 aaPredicted RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 RGS7P49802 495 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 TUBP50607 506 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 TKTL1P51854 596 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 BCAT1P54687 386 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 KDSRQ06136 332 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 DMWDQ09019 674 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 DHCR24Q15392 516 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 ANO4Q32M45 955 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 SNX30Q5VWJ9 437 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 FOXR2Q6PJQ5 311 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 BBS7Q8IWZ6 715 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 NAT16Q8N8M0 369 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 RBBP8NLQ8NC74 664 aaPredicted RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 LMO3Q8TAP4 145 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 TFAP2BQ92481 460 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 EXOC4Q96A65 974 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 ZFRQ96KR1 1074 aaKnown RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 LRRC4Q9HBW1 653 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 ZSCAN32Q9NX65 697 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 RASAL2Q9UJF2 1139 aa15□□□□□ -0.01
HOXC9-202ENST00000504557 RIF1Q5UIP0 2472 aaKnown RBP15□□□□□ -0.01
HOXC9-202ENST00000504557 SDK1Q7Z5N4 2213 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 E2F8A0AVK6 867 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 CHURC1-FNTBB4DL54 471 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 M0QYV0 167 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 PES1O00541 588 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 P4HA2O15460 535 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 RALAP11233 206 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 VDRP11473 427 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 ADH5P11766 374 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 LCP1P13796 627 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 USP8P40818 1118 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 SLC6A11P48066 632 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 PXNP49023 591 aaPredicted RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 FNTBP49356 437 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 MARSP56192 900 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 APBA1Q02410 837 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 ADIGQ0VDE8 80 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 BST2Q10589 180 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 EFEMP1Q12805 493 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 LPAL2Q16609 132 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 ZNF528Q3MIS6 628 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 LY6G5CQ5SRR4 150 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 GJB7Q6PEY0 223 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 RSRC2Q7L4I2 434 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 SCD5Q86SK9 330 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 ADGRG2Q8IZP9 1017 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 UBR7Q8N806 425 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 RPLP0P6Q8NHW5 317 aa14.99□□□□□ -0.01
HOXC9-202ENST00000504557 IPO9Q96P70 1041 aaKnown RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 KLF16Q9BXK1 252 aaPredicted RBP14.99□□□□□ -0.01
HOXC9-202ENST00000504557 ULBP1Q9BZM6 244 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms