RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ABHD2P08910 425 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PSMA2P25787 234 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 RARRES1P49788 294 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 GTF2A2P52657 109 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 EIF3EP60228 445 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 EN1Q05925 392 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TBL3Q12788 808 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 FSTL1Q12841 308 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 CBX3Q13185 183 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 MPP3Q13368 585 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 DLGAP5Q15398 846 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ANKDD1AQ495B1 522 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PRAMEF18Q5VWM3 479 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ACAD11Q709F0 780 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 SNX31Q8N9S9 440 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 KCTD6Q8NC69 237 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 RIN3Q8TB24 985 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 APOPT1Q96IL0 206 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 CEP170P1Q96L14 293 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF512Q96ME7 567 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TUBB6Q9BUF5 446 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 OXCT2Q9BYC2 517 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 WWP1Q9H0M0 922 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TSPYL2Q9H2G4 693 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ACSS3Q9H6R3 686 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM206Q9H813 350 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 EHMT1Q9H9B1 1298 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 SLC9A2Q9UBY0 812 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF180Q9UJW8 692 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ATRNL1Q5VV63 1379 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 A0A0B4J269 797 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 MTA2O94776 668 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 CDK4P11802 303 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ENO3P13929 434 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ITGB5P18084 799 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 YWHABP31946 246 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 GRIA1P42261 906 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 SPP2Q13103 211 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 OASLQ15646 514 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 KLHL38Q2WGJ6 581 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 SH3PXD2AQ5TCZ1 1133 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 FAM219BQ5XKK7 198 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PPP1R2P3Q6NXS1 205 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 FRMD7Q6ZUT3 714 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TMC7Q7Z402 723 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PPIL6Q8IXY8 311 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TNS4Q8IZW8 715 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TRIML2Q8N7C3 387 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 EXD1Q8NHP7 514 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 SPATA18Q8TC71 538 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 BSNDQ8WZ55 320 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 DTNBP1Q96EV8 351 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 FAM163AQ96GL9 167 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 CEP41Q9BYV8 373 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TMEM8AQ9HCN3 771 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 KCNH7Q9NS40 1196 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 NYAP2Q9P242 653 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 NXF1Q9UBU9 619 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 BLOC1S6Q9UL45 172 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 RBMX2Q9Y388 322 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PCDHB2Q9Y5E7 798 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PTPRJQ12913 1337 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TM9SF1O15321 606 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TMCC1O94876 653 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PDGFRBP09619 1106 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 IL1R2P27930 398 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 RFC1P35251 1148 aaPredicted RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ALDH1A3P47895 512 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 NPTX2P47972 431 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 MAP3K10Q02779 954 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 LMNB2Q03252 620 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ZNF252P-AS1Q0IIN9 211 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PPM1JQ5JR12 505 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PPM1LQ5SGD2 360 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 NXNQ6DKJ4 435 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 B3GNT6Q6ZMB0 384 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ANKRD23Q86SG2 305 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 ZBTB33Q86T24 672 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 LRRC43Q8N309 656 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TUFT1Q9NNX1 390 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 PFDN4Q9NQP4 134 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 STRIP2Q9ULQ0 834 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 TBX20Q9UMR3 447 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 APOBEC2Q9Y235 224 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 POMPQ9Y244 141 aa7.91□□□□□ -1.14
NEDD9-208ENST00000504387 MRPL11Q9Y3B7 192 aaKnown RBP7.91□□□□□ -1.14
NEDD9-208ENST00000504387 MYO18AQ92614 2054 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 PHLPP1O60346 1717 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 KIAA1551Q9HCM1 1747 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 PAPPAQ13219 1627 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 COL14A1Q05707 1796 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 IGKV6D-41A0A0C4DH26 115 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 TBX3O15119 743 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 HNRNPCL1O60812 293 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 APBA3O96018 575 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 PABPC4LP0CB38 370 aaKnown RBP7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ALDH1B1P30837 517 aa7.9□□□□□ -1.14
NEDD9-208ENST00000504387 ETV4P43268 484 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms