RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SEC16BQ96JE7 1060 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 INPP4AQ96PE3 977 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC1Q9BTT6 524 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 STK33Q9BYT3 514 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PITHD1Q9GZP4 211 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 EHD1Q9H4M9 534 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ETNK1Q9HBU6 452 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 NEK6Q9HC98 313 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 C1orf112Q9NSG2 853 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 EHD3Q9NZN3 535 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 EHD2Q9NZN4 543 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GCNT4Q9P109 453 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PPARGC1AQ9UBK2 798 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PARP2Q9UGN5 583 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 AMACRQ9UHK6 382 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 TUBE1Q9UJT0 475 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MYH10P35580 1976 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PMS2P1A4D2B8 440 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC53A6NM62 1247 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PHF20L1A8MW92 1017 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CAPN14A8MX76 684 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DCDC2CA8MYV0 355 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP6R2O75170 966 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SPAG7O75391 227 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MT-ND3P03897 115 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CD48P09326 243 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ACTN1P12814 892 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNE1P24864 410 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CDC27P30260 824 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 THBS2P35442 1172 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ECE1P42892 770 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 BTDP43251 543 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ADARP55265 1226 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RALGDSQ12967 914 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GRB10Q13322 594 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SGCGQ13326 291 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SMAD4Q13485 552 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 CTTNQ14247 550 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MAN2A1Q16706 1144 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MDH1BQ5I0G3 518 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM209BQ5JX69 171 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RNASEH2BQ5TBB1 312 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 METTL2BQ6P1Q9 378 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 POMZP3Q6PJE2 187 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 BNC2Q6ZN30 1099 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 APTXQ7Z2E3 356 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RFX6Q8HWS3 928 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC34Q8IZ02 419 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 KIF2BQ8N4N8 673 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MB21D1Q8N884 522 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAAF3Q8N9W5 541 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF680Q8NEM1 530 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 IL17RDQ8NFM7 739 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PLEKHO2Q8TD55 490 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ADAMTS16Q8TE57 1224 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 NKD2Q969F2 451 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GRAMD1AQ96CP6 724 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PRICKLE1Q96MT3 831 aaPredicted RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MTMR9Q96QG7 549 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 MED15Q96RN5 788 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 RANBP9Q96S59 729 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM118BQ9BPY3 351 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 C1QTNF7Q9BXJ2 289 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZMYND12Q9H0C1 365 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 PIH1D3Q9NQM4 214 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 GMIPQ9P107 970 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 AGO1Q9UL18 857 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DIMT1Q9UNQ2 313 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 COL4A3BPQ9Y5P4 624 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SNCAIPQ9Y6H5 919 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 COL4A1P02462 1669 aa3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 BAZ2BQ9UIF8 2168 aaKnown RBP3.82□□□□□ -1.8
PCDH11X-208ENST00000504220 SHOXO15266 292 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 HOXC11O43248 304 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 AP1G1O43747 822 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RNASEH1O60930 286 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TFAP2AP05549 437 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CPA3P15088 417 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 YBX3P16989 372 aaKnown RBP eCLIP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 IFNAR1P17181 557 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP3A5P20815 502 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJB1P25685 340 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KLRK1P26718 216 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 LONP1P36776 959 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TFAMQ00059 246 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GALK2Q01415 458 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PTK2Q05397 1052 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 INO80DQ53TQ3 878 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZBTB41Q5SVQ8 909 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF658Q5TYW1 1059 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CCNI2Q6ZMN8 369 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TMTC3Q6ZXV5 915 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CYB5R4Q7L1T6 521 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF572Q7Z3I7 529 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GPR142Q7Z601 462 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CROCCP2Q86T23 111 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms